Consensus taxonomy: Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria
from TS-ESOM, bin is a bit rough, added all Shinella scaffolds from ggkbase
contig | # features | sequence size | GC content (%) | Cov | Coding Density (%) | |
---|---|---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_54457
Species:
Shinella sp. DD12 (100%)
|
3 | 1153 bp | 61.75 | 2.60 | 97.83 | |
SCNpilot_expt_1000_bf_scaffold_40805
Species:
Shinella sp. DD12 (100%)
|
2 | 1146 bp | 57.33 | 2.62 | 91.62 | |
SCNpilot_expt_1000_bf_scaffold_44128
Species:
Shinella sp. DD12 (100%)
|
2 | 1046 bp | 61.95 | 2.63 | 95.79 | |
SCNpilot_expt_1000_bf_scaffold_43461
Species:
Shinella sp. DD12 (100%)
|
3 | 1614 bp | 63.69 | 2.63 | 91.45 | |
SCNpilot_expt_1000_bf_scaffold_41311
Species:
Shinella sp. DD12 (50%)
|
2 | 1130 bp | 65.93 | 2.65 | 100.09 | |
SCNpilot_expt_1000_bf_scaffold_29987
Species:
Shinella sp. DD12 (100%)
|
2 | 1491 bp | 69.42 | 2.68 | 100.80 | |
SCNpilot_expt_1000_bf_scaffold_41795
Species:
Shinella sp. DD12 (100%)
|
2 | 1117 bp | 63.92 | 2.69 | 99.91 | |
SCNpilot_expt_1000_bf_scaffold_58481
Species:
Shinella sp. DD12 (100%)
|
2 | 1111 bp | 64.36 | 2.70 | 100.18 | |
SCNpilot_expt_1000_bf_scaffold_30348
Species:
Shinella sp. DD12 (66.67%)
|
3 | 1476 bp | 61.72 | 2.71 | 66.46 | |
SCNpilot_expt_1000_bf_scaffold_54431
Species:
Shinella sp. DD12 (100%)
|
2 | 1106 bp | 65.01 | 2.71 | 78.39 | |
SCNpilot_expt_1000_bf_scaffold_24834
Species:
Shinella sp. DD12 (50%)
|
4 | 1746 bp | 60.37 | 2.72 | 92.27 | |
SCNpilot_expt_1000_bf_scaffold_28544
Species:
Shinella sp. DD12 (100%)
|
1 | 1555 bp | 64.44 | 2.73 | 99.94 | |
SCNpilot_expt_1000_bf_scaffold_39489
Species:
Shinella sp. DD12 (100%)
|
2 | 1182 bp | 64.72 | 2.75 | 99.75 | |
SCNpilot_expt_1000_bf_scaffold_33543
Species:
Shinella sp. DD12 (100%)
|
2 | 1357 bp | 68.02 | 2.76 | 100.15 | |
SCNpilot_expt_1000_bf_scaffold_36454
Species:
Shinella sp. DD12 (100%)
|
2 | 1269 bp | 67.69 | 2.76 | 99.29 | |
SCNpilot_expt_1000_bf_scaffold_32022
Species:
Shinella sp. DD12 (100%)
|
3 | 1897 bp | 60.83 | 2.77 | 76.70 | |
SCNpilot_expt_1000_bf_scaffold_33704
Species:
Shinella sp. DD12 (100%)
|
2 | 1351 bp | 65.43 | 2.78 | 91.71 | |
SCNpilot_expt_1000_bf_scaffold_48282
Species:
Shinella sp. DD12 (50%)
|
2 | 1440 bp | 62.22 | 2.78 | 56.46 | |
SCNpilot_expt_1000_bf_scaffold_54813
Species:
Shinella sp. DD12 (100%)
|
2 | 1251 bp | 59.79 | 2.80 | 51.80 | |
SCNpilot_expt_1000_bf_scaffold_27424
Species:
Shinella sp. DD12 (50%)
|
2 | 1607 bp | 69.32 | 2.80 | 94.46 | |
SCNpilot_expt_1000_bf_scaffold_78765
Species:
Shinella sp. DD12 (50%)
|
2 | 1251 bp | 51.72 | 2.80 | 68.11 | |
SCNpilot_expt_1000_bf_scaffold_45602
Species:
Shinella sp. DD12 (100%)
|
3 | 1428 bp | 61.55 | 2.80 | 91.18 | |
SCNpilot_expt_1000_bf_scaffold_37065
Species:
Shinella sp. DD12 (100%)
|
2 | 1252 bp | 64.94 | 2.80 | 96.33 | |
SCNpilot_expt_1000_bf_scaffold_34197
Species:
Shinella sp. DD12 (100%)
|
1 | 1336 bp | 65.64 | 2.81 | 99.70 | |
SCNpilot_expt_1000_bf_scaffold_66764
Species:
Shinella sp. DD12 (100%)
|
2 | 1151 bp | 54.82 | 2.82 | 67.25 | |
SCNpilot_expt_1000_bf_scaffold_43446
Species:
Shinella sp. DD12 (100%)
|
1 | 1065 bp | 60.19 | 2.82 | 78.87 | |
SCNpilot_expt_1000_bf_scaffold_53404
Species:
Shinella sp. DD12 (75%)
|
4 | 1854 bp | 54.31 | 2.83 | 78.96 | |
SCNpilot_expt_1000_bf_scaffold_58007
Species:
Shinella sp. DD12 (50%)
|
2 | 1319 bp | 51.71 | 2.84 | 70.05 | |
SCNpilot_expt_1000_bf_scaffold_69131
Species:
Shinella sp. DD12 (50%)
|
2 | 1226 bp | 46.25 | 2.85 | 51.39 | |
SCNpilot_expt_1000_bf_scaffold_60228
Species:
Shinella sp. DD12 (50%)
|
2 | 1223 bp | 50.29 | 2.86 | 75.31 | |
SCNpilot_expt_1000_bf_scaffold_61149
Species:
Shinella sp. DD12 (100%)
|
2 | 1310 bp | 57.40 | 2.86 | 51.98 | |
SCNpilot_expt_1000_bf_scaffold_37999
Species:
Shinella sp. DD12 (100%)
|
2 | 1225 bp | 62.53 | 2.86 | 86.45 | |
SCNpilot_expt_1000_bf_scaffold_36587
Species:
Shinella sp. DD12 (50%)
|
4 | 2100 bp | 61.05 | 2.86 | 76.57 | |
SCNpilot_expt_1000_bf_scaffold_79116
Species:
Shinella sp. DD12 (75%)
|
4 | 1740 bp | 51.32 | 2.87 | 64.31 | |
SCNpilot_expt_1000_bf_scaffold_54886
Species:
Shinella sp. DD12 (100%)
|
3 | 1394 bp | 60.62 | 2.87 | 64.35 | |
SCNpilot_expt_1000_bf_scaffold_38247
Species:
Shinella sp. DD12 (100%)
|
1 | 1219 bp | 64.48 | 2.87 | 99.92 | |
SCNpilot_expt_1000_bf_scaffold_44283
Species:
Shinella sp. DD12 (100%)
|
1 | 1042 bp | 58.73 | 2.88 | 86.08 | |
SCNpilot_expt_1000_bf_scaffold_38401
Species:
Shinella sp. DD12 (100%)
|
2 | 1215 bp | 64.61 | 2.88 | 86.91 | |
SCNpilot_expt_1000_bf_scaffold_51623
Species:
Shinella sp. DD12 (100%)
|
2 | 1384 bp | 55.49 | 2.89 | 73.92 | |
SCNpilot_expt_1000_bf_scaffold_82046
Species:
Shinella sp. DD12 (50%)
|
2 | 1036 bp | 57.24 | 2.90 | 62.84 | |
SCNpilot_expt_1000_bf_scaffold_30664
Species:
Shinella sp. DD12 (100%)
|
3 | 1982 bp | 61.76 | 2.90 | 62.51 | |
SCNpilot_expt_1000_bf_scaffold_53878
Species:
Shinella sp. DD12 (75%)
|
4 | 1208 bp | 66.64 | 2.90 | 94.62 | |
SCNpilot_expt_1000_bf_scaffold_44621
Species:
Shinella sp. DD12 (50%)
|
2 | 1031 bp | 59.94 | 2.91 | 91.95 | |
SCNpilot_expt_1000_bf_scaffold_41936
Species:
Shinella sp. DD12 (100%)
|
1 | 1112 bp | 65.92 | 2.92 | 99.82 | |
SCNpilot_expt_1000_bf_scaffold_38894
Species:
Shinella sp. DD12 (100%)
|
2 | 1199 bp | 67.06 | 2.92 | 100.08 | |
SCNpilot_expt_1000_bf_scaffold_54701
Species:
Shinella sp. DD12 (66.67%)
|
3 | 1619 bp | 59.17 | 2.93 | 62.26 | |
SCNpilot_expt_1000_bf_scaffold_46414
Species:
Shinella sp. DD12 (66.67%)
|
3 | 1609 bp | 56.00 | 2.95 | 55.19 | |
SCNpilot_expt_1000_bf_scaffold_18841
Species:
Shinella sp. DD12 (100%)
|
2 | 2204 bp | 62.98 | 2.95 | 93.78 | |
SCNpilot_expt_1000_bf_scaffold_45175
Species:
Shinella sp. DD12 (100%)
|
2 | 1014 bp | 62.92 | 2.96 | 100.30 | |
SCNpilot_expt_1000_bf_scaffold_39488
Species:
Shinella sp. DD12 (100%)
|
3 | 1182 bp | 61.34 | 2.96 | 76.40 |