Consensus taxonomy: Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria
from TS-ESOM, bin is a bit rough, added all Shinella scaffolds from ggkbase
contig | # features | sequence size | GC content (%) | Cov | Coding Density (%) | |
---|---|---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_27590
Species:
Shinella sp. DD12 (50%)
|
2 | 1600 bp | 65.31 | 2.97 | 98.81 | |
SCNpilot_expt_1000_bf_scaffold_39946
Species:
Shinella sp. DD12 (100%)
|
2 | 1683 bp | 62.09 | 2.97 | 78.43 | |
SCNpilot_expt_1000_bf_scaffold_50097
Species:
Shinella sp. DD12 (100%)
|
3 | 2101 bp | 64.92 | 2.97 | 77.39 | |
SCNpilot_expt_1000_bf_scaffold_36467
Species:
Shinella sp. DD12 (75%)
|
4 | 1679 bp | 54.68 | 2.98 | 56.82 | |
SCNpilot_expt_1000_bf_scaffold_48156
Species:
Shinella sp. DD12 (100%)
|
3 | 1594 bp | 62.48 | 2.98 | 86.01 | |
SCNpilot_expt_1000_bf_scaffold_34067
Species:
Shinella sp. DD12 (66.67%)
|
3 | 1340 bp | 64.18 | 2.99 | 84.40 | |
SCNpilot_expt_1000_bf_scaffold_34115
Species:
Shinella sp. DD12 (100%)
|
2 | 1338 bp | 64.72 | 2.99 | 91.48 | |
SCNpilot_expt_1000_bf_scaffold_45456
Species:
Shinella sp. DD12 (50%)
|
2 | 1005 bp | 64.78 | 2.99 | 95.52 | |
SCNpilot_expt_1000_bf_scaffold_65739
Species:
Shinella sp. DD12 (100%)
|
2 | 1083 bp | 55.03 | 3.00 | 79.50 | |
SCNpilot_expt_1000_bf_scaffold_46548
Species:
Shinella sp. DD12 (75%)
|
4 | 1749 bp | 63.92 | 3.00 | 94.00 | |
SCNpilot_expt_1000_bf_scaffold_52429
Species:
Shinella sp. DD12 (100%)
|
3 | 1252 bp | 63.82 | 3.00 | 87.22 | |
SCNpilot_expt_1000_bf_scaffold_34287
Species:
Shinella sp. DD12 (100%)
|
2 | 1333 bp | 63.84 | 3.00 | 96.55 | |
SCNpilot_expt_1000_bf_scaffold_40225
Species:
Shinella sp. DD12 (100%)
|
1 | 1162 bp | 64.03 | 3.01 | 99.66 | |
SCNpilot_expt_1000_bf_scaffold_31918
Species:
Shinella sp. DD12 (100%)
|
2 | 1414 bp | 67.19 | 3.01 | 96.32 | |
SCNpilot_expt_1000_bf_scaffold_29976
Species:
Shinella sp. DD12 (100%)
|
3 | 1492 bp | 61.13 | 3.02 | 90.88 | |
SCNpilot_expt_1000_bf_scaffold_51476
Species:
Shinella sp. DD12 (50%)
|
2 | 1489 bp | 63.67 | 3.02 | 93.69 | |
SCNpilot_expt_1000_bf_scaffold_46642
Species:
Shinella sp. DD12 (100%)
|
2 | 2142 bp | 59.85 | 3.03 | 67.37 | |
SCNpilot_expt_1000_bf_scaffold_48718
Species:
Shinella sp. DD12 (66.67%)
|
3 | 1402 bp | 61.77 | 3.03 | 83.24 | |
SCNpilot_expt_1000_bf_scaffold_30263
Species:
Shinella sp. DD12 (100%)
|
3 | 1480 bp | 66.82 | 3.04 | 95.88 | |
SCNpilot_expt_1000_bf_scaffold_34922
Species:
Shinella sp. DD12 (50%)
|
2 | 1313 bp | 59.48 | 3.05 | 85.91 | |
SCNpilot_expt_1000_bf_scaffold_66226
Species:
Shinella sp. DD12 (66.67%)
|
3 | 1144 bp | 66.43 | 3.06 | 103.85 | |
SCNpilot_expt_1000_bf_scaffold_30795
Species:
Shinella sp. DD12 (100%)
|
2 | 1458 bp | 60.43 | 3.09 | 76.75 | |
SCNpilot_expt_1000_bf_scaffold_21888
Species:
Shinella sp. DD12 (100%)
|
2 | 1942 bp | 62.56 | 3.09 | 91.61 | |
SCNpilot_expt_1000_bf_scaffold_68874
Species:
Shinella sp. DD12 (50%)
|
2 | 1132 bp | 64.05 | 3.09 | 63.07 | |
SCNpilot_expt_1000_bf_scaffold_70615
Species:
Shinella sp. DD12 (100%)
|
2 | 1133 bp | 60.19 | 3.09 | 66.99 | |
SCNpilot_expt_1000_bf_scaffold_60682
Species:
Shinella sp. DD12 (100%)
|
2 | 1131 bp | 58.89 | 3.09 | 54.38 | |
SCNpilot_expt_1000_bf_scaffold_45132
Species:
Shinella sp. DD12 (100%)
|
2 | 1373 bp | 65.62 | 3.10 | 79.10 | |
SCNpilot_expt_1000_bf_scaffold_66836
Species:
Shinella sp. DD12 (100%)
|
3 | 1130 bp | 63.27 | 3.10 | 94.51 | |
SCNpilot_expt_1000_bf_scaffold_41380
Species:
Shinella sp. DD12 (100%)
|
1 | 1129 bp | 64.04 | 3.10 | 99.91 | |
SCNpilot_expt_1000_bf_scaffold_35751
Species:
Shinella sp. DD12 (100%)
|
3 | 1289 bp | 63.54 | 3.10 | 80.53 | |
SCNpilot_expt_1000_bf_scaffold_64448
Species:
Shinella sp. DD12 (100%)
|
2 | 1129 bp | 63.77 | 3.10 | 79.45 | |
SCNpilot_expt_1000_bf_scaffold_48671
Species:
Shinella sp. DD12 (100%)
|
3 | 2012 bp | 63.82 | 3.11 | 85.14 | |
SCNpilot_expt_1000_bf_scaffold_41450
Species:
Shinella sp. DD12 (100%)
|
1 | 1126 bp | 61.10 | 3.11 | 52.22 | |
SCNpilot_expt_1000_bf_scaffold_41792
Species:
Shinella sp. DD12 (100%)
|
1 | 1117 bp | 65.80 | 3.13 | 99.91 | |
SCNpilot_expt_1000_bf_scaffold_41822
Species:
Shinella sp. DD12 (100%)
|
1 | 1116 bp | 64.43 | 3.14 | 87.90 | |
SCNpilot_expt_1000_bf_scaffold_71938
Species:
Shinella sp. DD12 (50%)
|
2 | 1113 bp | 62.26 | 3.14 | 66.58 | |
SCNpilot_expt_1000_bf_scaffold_37181
Species:
Shinella sp. DD12 (75%)
|
4 | 2064 bp | 59.69 | 3.15 | 88.81 | |
SCNpilot_expt_1000_bf_scaffold_42077
Species:
Shinella sp. DD12 (66.67%)
|
3 | 1108 bp | 59.39 | 3.16 | 43.86 | |
SCNpilot_expt_1000_bf_scaffold_31026
Species:
Shinella sp. DD12 (100%)
|
3 | 1897 bp | 62.36 | 3.16 | 89.51 | |
SCNpilot_expt_1000_bf_scaffold_56459
Species:
Shinella sp. DD12 (66.67%)
|
3 | 1260 bp | 57.46 | 3.17 | 77.86 | |
SCNpilot_expt_1000_bf_scaffold_24987
Species:
Shinella sp. DD12 (100%)
|
2 | 1737 bp | 65.57 | 3.17 | 96.37 | |
SCNpilot_expt_1000_bf_scaffold_31404
Species:
Shinella sp. DD12 (80%)
|
5 | 3080 bp | 61.27 | 3.17 | 65.65 | |
SCNpilot_expt_1000_bf_scaffold_29833
Species:
Shinella sp. DD12 (100%)
|
2 | 1498 bp | 66.22 | 3.17 | 98.73 | |
SCNpilot_expt_1000_bf_scaffold_31862
Species:
Shinella sp. DD12 (75%)
|
4 | 2672 bp | 66.43 | 3.18 | 87.01 | |
SCNpilot_expt_1000_bf_scaffold_28149
Species:
Shinella sp. DD12 (100%)
|
2 | 1574 bp | 55.65 | 3.18 | 74.52 | |
SCNpilot_expt_1000_bf_scaffold_20669
Species:
Shinella sp. DD12 (100%)
|
3 | 2041 bp | 64.38 | 3.18 | 91.43 | |
SCNpilot_expt_1000_bf_scaffold_36954
Species:
Shinella sp. DD12 (100%)
|
2 | 1255 bp | 65.58 | 3.19 | 92.27 | |
SCNpilot_expt_1000_bf_scaffold_28306
Species:
Shinella sp. DD12 (100%)
|
2 | 1567 bp | 66.88 | 3.19 | 89.79 | |
SCNpilot_expt_1000_bf_scaffold_51245
Species:
Shinella sp. DD12 (66.67%)
|
3 | 1402 bp | 57.13 | 3.21 | 50.29 | |
SCNpilot_expt_1000_bf_scaffold_44209
Species:
Shinella sp. DD12 (66.67%)
|
3 | 1863 bp | 58.35 | 3.22 | 79.23 |