name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_616_1
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..196)
|
60 kDa chaperonin n=1 Tax=Rhizobium sp. CF080 RepID=J3CSI2_9RHIZ
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
groEL-1; chaperonin GroEL 1
|
|
SCNpilot_expt_1000_bf_scaffold_616_2
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(259..552)
|
10 kDa chaperonin n=3 Tax=Rhizobium fredii RepID=C3MGU0_RHISN
groES; 10 kDa chaperonin; K04078 chaperonin GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
|
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SCNpilot_expt_1000_bf_scaffold_616_3
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
723..2096
|
Chromate transporter protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3I2C7_9RHIZ
rbh
Chromate transporter protein {ECO:0000313|EMBL:EPE99336.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
chrA; chromate transporter protein; K07240 chromate transporter
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_616_4
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2189..3040
|
haloacid dehalogenase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003617B70
rbh
HAD family hydrolase {ECO:0000313|EMBL:KEQ09288.1}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;"
HAD-superfamily hydrolase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_616_5
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3066..4046
|
ribF; bifunctional riboflavin kinase/FMN adenylyltransferase; K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
Riboflavin biosynthesis protein RibF n=2 Tax=Rhizobium/Agrobacterium group RepID=B9J9Z3_AGRRK
|
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SCNpilot_expt_1000_bf_scaffold_616_6
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4047..4511)
|
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
Ribonuclease VapC n=1 Tax=Rhizobium sp. CF080 RepID=J2R022_9RHIZ
plasmid stabilization protein; K07062
|
|
SCNpilot_expt_1000_bf_scaffold_616_7
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4508..4792)
|
Uncharacterized protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KNU5_RHISN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACP21753.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
|
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SCNpilot_expt_1000_bf_scaffold_616_8
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5106..8033
|
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
isoleucyl-tRNA synthase n=1 Tax=Rhizobium giardinii RepID=UPI00036A81AA
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_616_9
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8179..8799
|
Hypothetical conserved protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3PRC3_RHIE6
hypothetical protein
Hypothetical conserved protein {ECO:0000313|EMBL:ACE89906.1}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;"
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SCNpilot_expt_1000_bf_scaffold_616_10
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8872..9381
|
Acetyltransferase n=1 Tax=Rhizobium sp. CF080 RepID=J3BVB0_9RHIZ
Acetyltransferase {ECO:0000313|EMBL:CDN47994.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
N-acetyltransferase GCN5
|
|
SCNpilot_expt_1000_bf_scaffold_616_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9385..9687)
|
Putative membrane protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QY18_BREDI
Putative membrane protein {ECO:0000313|EMBL:EGF95788.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
|
|
SCNpilot_expt_1000_bf_scaffold_616_12
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9684..10142)
|
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
Cytosine/adenosine deaminase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D455_9RHIZ
codAch1; cytosine deaminase
|
|
SCNpilot_expt_1000_bf_scaffold_616_13
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10210..12366
|
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
Pseudouridine synthase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U8Q0_9RHIZ
pseudouridylate synthase, subunit B protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_616_14
unknown
|
Not on your lists |
comp(12212..12646)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_616_15
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12813..13700
|
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V702_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN88961.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
patatin-like phospholipase family protein
|
|
SCNpilot_expt_1000_bf_scaffold_616_16
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13707..15512)
|
Transporter, monovalent cation:proton antiporter-2 (CPA2) family n=1 Tax=Rhizobium sp. CF142 RepID=J1SZE6_9RHIZ
rbh
Glutathione-regulated potassium-efflux transporter protein KefB {ECO:0000313|EMBL:AJC78095.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
kefB; glutathione-regulated potassium-efflux system protein; K03455 monovalent cation:H+ antiporter-2, CPA2 family
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_616_17
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15627..16976
|
Modulator of DNA gyrase protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UFM4_9RHIZ
modulator of DNA gyrase protein
Modulator of DNA gyrase protein {ECO:0000313|EMBL:ENN88963.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
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SCNpilot_expt_1000_bf_scaffold_616_18
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16979..17779
|
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
Inositol monophosphatase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JA06_AGRRK
Inositol monophosphatase protein {ECO:0000313|EMBL:ACM25624.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
|
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SCNpilot_expt_1000_bf_scaffold_616_19
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17846..18079
|
Uncharacterized protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VZJ2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AIC26034.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_616_20
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18210..19529
|
three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; K02527 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
rbh
3-deoxy-D-manno-octulosonic acid transferase n=1 Tax=Rhizobium leguminosarum RepID=UPI00035DEFBD
rbh
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:AEH77746.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
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SCNpilot_expt_1000_bf_scaffold_616_21
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19547..20257
|
Phosphoglycolate phosphatase n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5PSE0_9RHIZ
Phosphoglycolate phosphatase {ECO:0000313|EMBL:EJT02533.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
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SCNpilot_expt_1000_bf_scaffold_616_22
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20298..21341
|
lpxK; tetraacyldisaccharide 4'-kinase; K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
Tetraacyldisaccharide 4'-kinase {ECO:0000255|HAMAP-Rule:MF_00409}; EC=2.7.1.130 {ECO:0000255|HAMAP-Rule:MF_00409};; Lipid A 4'-kinase {ECO:0000255|HAMAP-Rule:MF_00409}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
Tetraacyldisaccharide 4'-kinase n=2 Tax=Rhizobium/Agrobacterium group RepID=LPXK_AGRRK
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SCNpilot_expt_1000_bf_scaffold_616_23
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21369..22922)
|
Trimethylamine methyltransferase MttB1 {ECO:0000313|EMBL:EYR83443.1}; EC=2.1.1.250 {ECO:0000313|EMBL:EYR83443.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
trimethylamine methyltransferase; K14083 trimethylamine methyltransferase [EC:2.1.1.-]
Trimethylamine methyltransferase MttB1 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CY74_9RHIZ
|
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SCNpilot_expt_1000_bf_scaffold_616_24
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23027..23959
|
Transcription regulator protein n=2 Tax=Rhizobium meliloti RepID=K0P3K9_RHIML
rbh
transcriptional regulator
rbh
Putative transcription regulator protein {ECO:0000313|EMBL:EHK75056.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
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SCNpilot_expt_1000_bf_scaffold_616_25
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23990..25351)
|
GGDEF family protein n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8BFT6_RHIRD
rbh
Putative signaling protein {ECO:0000313|EMBL:GAK70115.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
Diguanylate cyclase
rbh
|
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SCNpilot_expt_1000_bf_scaffold_616_26
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25480..27153)
|
Putative two-component sensor histidine kinase transcriptional regulatory protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1MKU6_RHIL3
rbh
two-component sensor histidine kinase transcriptional regulatory protein
rbh
Putative two-component sensor histidine kinase transcriptional regulatory protein {ECO:0000313|EMBL:CAK06408.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
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SCNpilot_expt_1000_bf_scaffold_616_27
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27543..29369
|
DNA mismatch repair protein MutL n=1 Tax=Rhizobium sp. AP16 RepID=J2CSN6_9RHIZ
rbh
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
mutL; DNA mismatch repair protein; K03572 DNA mismatch repair protein MutL
rbh
|
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SCNpilot_expt_1000_bf_scaffold_616_28
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29451..29681
|
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NAW1_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF18155.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
hypothetical protein
|
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SCNpilot_expt_1000_bf_scaffold_616_29
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29792..30421)
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photosystem reaction center subunit H n=1 Tax=Rhizobium phaseoli RepID=UPI0003117554
Uncharacterized protein {ECO:0000313|EMBL:EJJ30614.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
PRC-barrel domain-containing protein
|
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SCNpilot_expt_1000_bf_scaffold_616_30
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30645..31532)
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Putative gluconolactonase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHP1_RHITR
putative gluconolactonase
Gluconolaconase {ECO:0000313|EMBL:KEA05410.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
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