name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_2151_1
CG_Gallio_02, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..702
|
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AEQ5_9PROT
hypothetical protein
Tax=CG_Gallio_02
|
|
SCNpilot_expt_1000_bf_scaffold_2151_2
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(734..1525)
|
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
trpC; indole-3-glycerol phosphate synthase (EC:4.1.1.48); K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48]
indole-3-glycerol-phosphate synthase n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI00035C9055
|
|
SCNpilot_expt_1000_bf_scaffold_2151_3
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1531..2547)
|
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18); K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18]
rbh
Anthranilate phosphoribosyltransferase n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XPM7_RHIRD
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2151_4
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2567..2713)
|
ppiD1; peptidyl prolyl cis-trans isomerase D signal peptide protein (EC:5.2.1.8); K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037BB093
Folding chaperone domain-containing protein {ECO:0000313|EMBL:AGS21967.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2151_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2749..3216)
|
Peptidyl prolyl cis-trans isomerase D signal peptide protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJ12_RHITR
peptidyl prolyl cis-trans isomerase D signal peptide protein
Peptidyl prolyl cis-trans isomerase D signal peptide protein {ECO:0000313|EMBL:AGB71227.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2151_6
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3356..4399)
|
Peptidyl-prolyl cis-trans isomerase D {ECO:0000313|EMBL:CDM58084.1}; EC=5.2.1.8 {ECO:0000313|EMBL:CDM58084.1};; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
ppiD1; peptidyl-prolyl cis-trans isomerase D signal peptide protein (EC:5.2.1.8); K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003686E35
|
|
SCNpilot_expt_1000_bf_scaffold_2151_7
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4607..4873
|
Uncharacterized protein n=1 Tax=Rhizobium sp. CF122 RepID=J2J087_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDM58085.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2151_8
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5007..5642
|
Protein ExoD n=8 Tax=Rhizobium meliloti RepID=EXOD_RHIME
rbh
Exopolysaccharide synthesis ExoD
rbh
Protein exoD {ECO:0000313|EMBL:CDH87695.1}; TaxID=1401243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti RU11/001.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2151_9
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5753..6472
|
nuclease n=1 Tax=Rhizobium radiobacter RepID=UPI000381B6B6
Nuclease {ECO:0000313|EMBL:KDR90853.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;"
conserved exported protein of unknown function
|
|
SCNpilot_expt_1000_bf_scaffold_2151_10
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6559..7791)
|
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2ILP6_9RHIZ
rbh
Uncharacterized protein {ECO:0000313|EMBL:EUC00216.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2151_11
unknown
|
Not on your lists |
comp(8023..8136)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_2151_12
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8440..9366)
|
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000374E3D5
rbh
DMT superfamily inner membrane transporter protein {ECO:0000313|EMBL:AJD43990.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2151_13
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9594..10226
|
Transacetylase n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XWC3_RHIRD
rbh
Transacetylase {ECO:0000313|EMBL:EHH05408.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;"
transacetylase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2151_14
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10362..10667
|
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NCW0_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF18905.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2151_15
Mesorhizobium sp. L103C119B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10822..11886)
|
UPI0003CFB03A related cluster n=1 Tax=unknown RepID=UPI0003CFB03A
rbh
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESZ68103.1}; TaxID=1287085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C119B0.;"
ABC transporter-like protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2151_16
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11957..12682)
|
oxidoreductase n=1 Tax=Rhizobium gallicum RepID=UPI0003733D5C
rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EHK76289.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
short-chain dehydrogenase/reductase SDR
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2151_17
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12795..14294)
|
ABC transporter substrate-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00038079B2
rbh
Extracellular solute-binding protein {ECO:0000313|EMBL:EMS95644.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;"
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2151_18
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14388..15215)
|
ABC transporter permease n=1 Tax=Rhizobium leguminosarum RepID=UPI000379AF0A
rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EHK76291.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2151_19
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15217..16104)
|
ABC transporter permease n=1 Tax=Rhizobium gallicum RepID=UPI00035C5CAD
rbh
ABC transporter permease {ECO:0000313|EMBL:AHF87494.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
binding-protein-dependent transport system inner membrane protein; K02025 multiple sugar transport system permease protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2151_20
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16318..17556)
|
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
glpD; glycerol-3-phosphate dehydrogenase; K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
Glycerol-3-phosphate dehydrogenase n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0G325_RHIML
|
|
SCNpilot_expt_1000_bf_scaffold_2151_21
unknown
|
Not on your lists |
17996..18415
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_2151_22
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18667..20022)
|
3-dehydroquinate synthase n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UD01_SINMW
rbh
3-dehydroquinate synthase
rbh
3-dehydroquinate synthase {ECO:0000313|EMBL:ABR61531.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2151_23
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20110..21126
|
hypothetical protein n=1 Tax=Rhizobium RepID=UPI00035F9A63
rbh
DeoR family transcriptional regulator
rbh
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:ABR61532.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2151_24
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21247..22758
|
hypothetical protein n=1 Tax=Rhizobium gallicum RepID=UPI000371335D
rbh
Xylulokinase {ECO:0000313|EMBL:AHF87489.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2151_25
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22813..23856)
|
Putative D-xylulose reductase {ECO:0000313|EMBL:CDM61428.1}; EC=1.1.1.9 {ECO:0000313|EMBL:CDM61428.1};; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
Theronine dehydrogenase-like Zn-dependent dehydrogenase n=1 Tax=Rhizobium sp. CF122 RepID=J2ICL8_9RHIZ
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2151_26
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24036..24350)
|
plasmid stabilization protein n=1 Tax=Aureimonas ureilytica RepID=UPI00037A96EE
Uncharacterized protein {ECO:0000313|EMBL:EYR80977.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2151_27
unknown
|
Not on your lists |
comp(24412..24666)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_2151_28
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24816..25241
|
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UZR5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN87105.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2151_29
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25252..26382)
|
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
Queuine tRNA-ribosyltransferase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JWX1_AGRVS
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2151_30
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26382..27464)
|
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-]
rbh
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Rhizobium sp. CF080 RepID=J3BVA6_9RHIZ
rbh
|