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SCNpilot_expt_1000_bf_scaffold_8504

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8504_1
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..336)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000376F599
probabable oxidoreductase
Probable oxidoreductase {ECO:0000313|EMBL:CAC46014.1}; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;"
SCNpilot_expt_1000_bf_scaffold_8504_2
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(342..1199)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1MGC1_RHIL3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAK08002.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
SCNpilot_expt_1000_bf_scaffold_8504_3
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1931..3277
DNA (1347bp) protein (449aa)
parE; DNA gyrase subunit B; K02622 topoisomerase IV subunit B [EC:5.99.1.-]
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
DNA topoisomerase 4 subunit B n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A510_RHIFH
SCNpilot_expt_1000_bf_scaffold_8504_4
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3241..3462
DNA (222bp) protein (74aa)
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
parE; DNA topoisomerase IV subunit B; K02622 topoisomerase IV subunit B [EC:5.99.1.-]
DNA topoisomerase 4 subunit B n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QQ24_9RHIZ
SCNpilot_expt_1000_bf_scaffold_8504_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3751..4299
DNA (549bp) protein (183aa)
Permease n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U983_RHIRD
Permease {ECO:0000313|EMBL:CDN93749.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
Permease
SCNpilot_expt_1000_bf_scaffold_8504_6
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4296..4799
DNA (504bp) protein (168aa)
ABC transporter permease n=1 Tax=Rhizobium RepID=UPI00035FF7E6
Putative membrane protein {ECO:0000313|EMBL:AHK01590.1}; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens LBA4213 (Ach5).;"
Permease
SCNpilot_expt_1000_bf_scaffold_8504_7
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4900..5667
DNA (768bp) protein (256aa)
cah; carbonic anhydrase Cah (EC:4.2.1.1); K01674 carbonic anhydrase [EC:4.2.1.1]
Carbonate dehydratase n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QVM8_RALPI
Carbonate dehydratase {ECO:0000313|EMBL:AGW94974.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
SCNpilot_expt_1000_bf_scaffold_8504_8
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5696..6823)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Rhizobium phaseoli RepID=UPI00035C6BFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI55126.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
SCNpilot_expt_1000_bf_scaffold_8504_9
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7044..7925
DNA (882bp) protein (294aa)
citrate (pro-3S)-lyase; K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003739FB7
Citrate lyase {ECO:0000313|EMBL:KFG70286.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
SCNpilot_expt_1000_bf_scaffold_8504_10
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7926..8453)
DNA (528bp) protein (176aa)
Conserved protein of DIM6/NTAB family n=1 Tax=Rhizobium sp. AP16 RepID=J2WGP2_9RHIZ
hypothetical protein
Flavin reductase {ECO:0000313|EMBL:KEA06755.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
Displaying 10 items

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