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SCNpilot_expt_1000_bf_scaffold_8841

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8841_1
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..182)
DNA (180bp) protein (60aa)
glycosyltransferase; K12995 rhamnosyltransferase [EC:2.4.1.-]
glycosyl transferase family 1 n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00036825CE
Glycosyl transferase family 1 {ECO:0000313|EMBL:KEA04734.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
SCNpilot_expt_1000_bf_scaffold_8841_2
Pseudomonas extremaustralis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1459..2208)
DNA (750bp) protein (250aa)
transcriptional regulator n=1 Tax=Pseudomonas mendocina RepID=UPI0003614DD9
Transcriptional regulator {ECO:0000313|EMBL:EZI27589.1}; TaxID=1117958 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas extremaustralis 14-3 substr. 14-3b.;"
AraC family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_8841_3
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2359..3609
DNA (1251bp) protein (417aa)
peptidase M29 n=1 Tax=Rhizobium meliloti RepID=UPI0003823386
Peptidase M29 {ECO:0000313|EMBL:EPR15588.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;"
peptidase M29 aminopeptidase II
SCNpilot_expt_1000_bf_scaffold_8841_4
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3637..4056)
DNA (420bp) protein (140aa)
Putative transporter, permease protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2A926_RHIET
Putative transporter, permease protein {ECO:0000313|EMBL:EGE58958.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
transporter permease; K15269 probable blue pigment (indigoidine) exporter
SCNpilot_expt_1000_bf_scaffold_8841_5
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4601..5083
DNA (483bp) protein (161aa)
MarR family transcriptional regulator n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3IMI5_9RHIZ
MarR family transcriptional regulator {ECO:0000313|EMBL:EPE99923.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
MarR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_8841_6
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5159..5749)
DNA (591bp) protein (197aa)
Putative NAD(P)H oxidoreductase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V6E0_9RHIZ
Putative NAD(P)H oxidoreductase {ECO:0000313|EMBL:ENN89405.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
NAD(P)H dehydrogenase protein
SCNpilot_expt_1000_bf_scaffold_8841_7
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5986..7281)
DNA (1296bp) protein (432aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
xseA; exodeoxyribonuclease VII large subunit; K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Exodeoxyribonuclease 7 large subunit n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VPB6_RHILT
SCNpilot_expt_1000_bf_scaffold_8841_8
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7562..7825
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J3CE57_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EUC00561.1}; Flags: Precursor;; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8841_9
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7825..9132
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI0003650AF7
Uncharacterized protein {ECO:0000313|EMBL:KEQ03752.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8841_10
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9179..11008)
DNA (1830bp) protein (610aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B5ZYC4_RHILW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACI57541.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
SCNpilot_expt_1000_bf_scaffold_8841_11
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11135..12124
DNA (990bp) protein (330aa)
Glycosyltransferase family 2 protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5RYI1_RHIET rbh
glycosyltransferase family 2 protein rbh
Glycosyltransferase family 2 protein {ECO:0000313|EMBL:AGS20146.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
SCNpilot_expt_1000_bf_scaffold_8841_12
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12144..12569
DNA (426bp) protein (142aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Rhizobium sp. CF080 RepID=J2KEV0_9RHIZ
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:CDN56717.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
Displaying 12 items

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