name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1163_1
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..346)
|
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LPB0_RHITR
Transmembrane transcriptional regulator (Anti-sigma factor) {ECO:0000313|EMBL:KEA06168.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1163_2
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(352..870)
|
RNA polymerase sigma70 n=1 Tax=Rhizobium giardinii RepID=UPI0003656CAC
RNA polymerase sigma70 {ECO:0000313|EMBL:KDP76183.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
sige3; RNA polymerase sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
|
|
SCNpilot_expt_1000_bf_scaffold_1163_3
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1135..1791)
|
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000363036B
Uncharacterized protein {ECO:0000313|EMBL:ENN87952.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1163_4
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1882..2745)
|
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U7F6_RHIRD
Metallophosphatase {ECO:0000313|EMBL:KJF73752.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1163_5
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2786..3274
|
ADP-ribose pyrophosphatase n=1 Tax=Rhizobium sp. CF080 RepID=J3BKG9_9RHIZ
DNA mismatch repair protein MutT {ECO:0000313|EMBL:KEQ09854.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
nudix hydrolase
|
|
SCNpilot_expt_1000_bf_scaffold_1163_6
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3281..4279)
|
Glutathione S-transferase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9J7C5_AGRRK
glutathione S-transferase; K07393 putative glutathione S-transferase
Uncharacterized protein {ECO:0000313|EMBL:GAJ90653.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1163_7
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4531..5085
|
Putative acetyltransferase n=1 Tax=Rhizobium sp. AP16 RepID=J2WS96_9RHIZ
Putative acetyltransferase {ECO:0000313|EMBL:EJK85888.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
acetyltransferase
|
|
SCNpilot_expt_1000_bf_scaffold_1163_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5072..5524)
|
Putative acetyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LKK4_RHITR
putative acetyltransferase
Putative acetyltransferase {ECO:0000313|EMBL:AGB71948.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1163_9
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5521..7590)
|
Transmembrane protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HGA9_9RHIZ
rbh
Transmembrane protein {ECO:0000313|EMBL:EPE97912.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1163_10
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7592..10411)
|
RNA-binding protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B3DFD4
rbh
Aerotolerance regulator domain-containing protein {ECO:0000313|EMBL:AJD42005.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1163_11
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10408..11328)
|
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J1T2V4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ25956.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1163_12
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11345..12358)
|
ATPase AAA n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037117D7
rbh
ATPase {ECO:0000313|EMBL:EJT04338.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1163_13
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12539..13162
|
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00036A4021
rbh
Uncharacterized protein {ECO:0000313|EMBL:EPE97908.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
hypothetical protein; K09986 hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1163_14
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13159..13794
|
DNA mismatch repair protein MutT n=1 Tax=Rhizobium mongolense RepID=UPI0003B2F4D1
rbh
NUDIX hydrolase domain-containing protein {ECO:0000313|EMBL:AJD42001.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
NTP pyrophosphohydrolase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1163_15
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13791..15050
|
poly(A) polymerase n=1 Tax=Rhizobium leguminosarum RepID=UPI00037A3D5E
rbh
tRNA nucleotidyltransferase/poly(A) polymerase {ECO:0000313|EMBL:EJB07382.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1163_16
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15051..15242)
|
small metal-binding protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00036E68DF
Uncharacterized protein {ECO:0000313|EMBL:CDM58600.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1163_17
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15354..15632)
|
Uncharacterized protein n=1 Tax=Rhizobium sp. AP16 RepID=J2D7W6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJK85899.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1163_18
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15750..16661)
|
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coproporphyrinogenase {ECO:0000256|HAMAP-Rule:MF_00333};; EC=1.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00333};; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
hemF; coproporphyrinogen III oxidase (EC:1.3.3.3); K00228 coproporphyrinogen III oxidase [EC:1.3.3.3]
rbh
coproporphyrinogen III oxidase n=1 Tax=Rhizobium giardinii RepID=UPI0003661EE5
|
|
SCNpilot_expt_1000_bf_scaffold_1163_19
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16825..17085
|
Uncharacterized protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9J7B1_AGRRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEA06187.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1163_20
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17190..18179
|
Flagellin/flagellar hook associated protein n=1 Tax=Rhizobium sp. CF080 RepID=J2HUJ9_9RHIZ
Flagellin domain protein {ECO:0000313|EMBL:EUC00604.1}; Flags: Precursor;; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
flaA; flagella associated protein
|
|
SCNpilot_expt_1000_bf_scaffold_1163_21
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18235..19500)
|
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMJ1_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB71936.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1163_22
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19599..19910)
|
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
tRNA methyltransferase n=1 Tax=Rhizobium mongolense RepID=UPI0003B76CF8
RNA methyltransferase, TrmH family
|
|
SCNpilot_expt_1000_bf_scaffold_1163_23
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20460..22343
|
Uncharacterized ABC transporter ATP-binding protein HI_1051 n=1 Tax=Rhizobium sp. RepID=L0NG67_RHISP
rbh
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEQ08881.1}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;"
ABC transporter ATP-binding protein; K06147 ATP-binding cassette, subfamily B, bacterial
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1163_24
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22424..22864
|
Uncharacterized protein {ECO:0000313|EMBL:KFA92938.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1163_25
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22964..23704
|
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031729CB
Methyltransferase {ECO:0000313|EMBL:KGM30586.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
methyltransferase
|
|
SCNpilot_expt_1000_bf_scaffold_1163_26
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23729..23992)
|
UPI0003CED505 related cluster n=1 Tax=unknown RepID=UPI0003CED505
hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1163_27
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23992..24252)
|
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1M3E1_RHIL3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAK12384.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1163_28
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24407..26275
|
ABC transporter n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9J7A6_AGRRK
rbh
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial
rbh
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEA06192.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1163_29
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26617..27195
|
ubiquinol-cytochrome c reductase, iron-sulfur subunit; K00411 ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:1.10.2.2]
rbh
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6U9Q3_SINMW
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1163_30
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27209..28474
|
Cytochrome b n=1 Tax=Rhizobium sp. RepID=L0NG61_RHISP
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;"
fbcB; ubiquinol-cytochrome c reductase cytochrome b subunit; K00412 ubiquinol-cytochrome c reductase cytochrome b subunit
rbh
|