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SCNpilot_expt_1000_bf_scaffold_1268

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1268_1
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..907)
DNA (906bp) protein (302aa)
Acetolactate synthase (EC:2.2.1.6); K03336 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase [EC:3.7.1.-]
Thiamine pyrophosphate central domain-containing protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FCW0_9RHIZ
Thiamine pyrophosphate central domain-containing protein {ECO:0000313|EMBL:EHS49335.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
SCNpilot_expt_1000_bf_scaffold_1268_2
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(904..2820)
DNA (1917bp) protein (639aa)
iolC; myo-inositol catabolism IolC protein; K03338 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92] rbh
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2IUY3_9RHIZ rbh
Myo-inositol catabolism IolC protein {ECO:0000313|EMBL:CDN58163.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
SCNpilot_expt_1000_bf_scaffold_1268_3
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3040..3864)
DNA (825bp) protein (275aa)
Transcriptional regulator, RpiR family n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FCU0_9RHIZ rbh
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EHS49337.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
transcriptional regulator RpiR family rbh
SCNpilot_expt_1000_bf_scaffold_1268_4
Brucella sp. BO2, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4060..5064
DNA (1005bp) protein (335aa)
oxidoreductase (EC:1.1.1.18); K00010 myo-inositol 2-dehydrogenase [EC:1.1.1.18] rbh
Myo-inositol 2-dehydrogenase {ECO:0000313|EMBL:EFM60574.1}; EC=1.1.1.18 {ECO:0000313|EMBL:EFM60574.1};; TaxID=693750 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. BO2.;"
Myo-inositol 2-dehydrogenase n=1 Tax=Brucella sp. BO2 RepID=E2PKB4_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_1268_5
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5277..5879
DNA (603bp) protein (201aa)
protein hupE n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000381E0B7
Hydrogenase/urease accessory protein {ECO:0000313|EMBL:CDM61580.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
HupE/UreJ protein; K03192 urease accessory protein
SCNpilot_expt_1000_bf_scaffold_1268_6
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5967..6728)
DNA (762bp) protein (254aa)
cobM; precorrin-4 C11-methyltransferase CobM (EC:2.1.1.133); K05936 precorrin-4 C11-methyltransferase [EC:2.1.1.133] rbh
Precorrin-4 C11-methyltransferase protein n=1 Tax=Ensifer adhaerens RepID=I0FX74_ENSAD rbh
Precorrin-4 C11-methyltransferase protein {ECO:0000313|EMBL:BAL73111.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
SCNpilot_expt_1000_bf_scaffold_1268_7
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7010..8125)
DNA (1116bp) protein (372aa)
cobL; decarboxylating precorrin-6Y C(5,15)-methyltransferase; K00595 precorrin-6Y C5,15-methyltransferase / precorrin-8W decarboxylase [EC:2.1.1.132 1.-.-.-]
precorrin-6y methyltransferase n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000364D22E
Precorrin-6Y C5,15-methyltransferase (Decarboxylating) protein {ECO:0000313|EMBL:KEC76670.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
SCNpilot_expt_1000_bf_scaffold_1268_8
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8247..9002
DNA (756bp) protein (252aa)
precorrin-6x reductase; K05895 precorrin-6X reductase [EC:1.3.1.54] rbh
Precorrin-6x reductase n=9 Tax=Rhizobium meliloti RepID=F6E2S5_SINMK rbh
Precorrin-6x reductase {ECO:0000313|EMBL:AEH80335.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
SCNpilot_expt_1000_bf_scaffold_1268_9
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8981..9745)
DNA (765bp) protein (255aa)
cobJ; CbiG protein/precorrin-3B C17-methyltransferase; K05934 precorrin-3B C17-methyltransferase [EC:2.1.1.131] rbh
Precorrin-3B C17-methyltransferase n=1 Tax=Ensifer adhaerens RepID=I0FX71_ENSAD rbh
Precorrin-3B C17-methyltransferase {ECO:0000313|EMBL:BAL73108.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
SCNpilot_expt_1000_bf_scaffold_1268_10
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9742..10479)
DNA (738bp) protein (246aa)
cobI; precorrin-2 C(20)-methyltransferase; K03394 precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] rbh
precorrin-2 C20-methyltransferase n=1 Tax=Rhizobium giardinii RepID=UPI00037F2EB7 rbh
Precorrin-2 C20-methyltransferase {ECO:0000313|EMBL:AEH80338.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
SCNpilot_expt_1000_bf_scaffold_1268_11
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10476..11108)
DNA (633bp) protein (211aa)
cobH; precorrin-8X methylmutase (EC:5.4.1.2); K06042 precorrin-8X methylmutase [EC:5.4.1.2]
precorrin-8X methylmutase n=1 Tax=Rhizobium giardinii RepID=UPI00035FE096 rbh
Precorrin-8X methylmutase {ECO:0000313|EMBL:KEC76674.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
SCNpilot_expt_1000_bf_scaffold_1268_12
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11105..12586)
DNA (1482bp) protein (494aa)
Precorrin-3B synthase; EC=1.14.13.83;; TaxID=43306 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas denitrificans.;"
precorrin-3B synthase (EC:1.14.13.83); K02229 precorrin-3B synthase [EC:1.14.13.83] rbh
Precorrin-3B synthase n=1 Tax=Pseudomonas denitrificans RepID=COBG_PSEDE rbh
SCNpilot_expt_1000_bf_scaffold_1268_13
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12667..13437)
DNA (771bp) protein (257aa)
cobF; precorrin-6A synthase (EC:2.1.1.152) rbh
Precorrin 6A synthase n=1 Tax=Ensifer adhaerens RepID=I0FX67_ENSAD rbh
Precorrin 6A synthase {ECO:0000313|EMBL:KEC76676.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
SCNpilot_expt_1000_bf_scaffold_1268_14
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13505..14464)
DNA (960bp) protein (320aa)
Uncharacterized transporter AF_0266 n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AIE0_RHIFH
Membrane protein {ECO:0000313|EMBL:KDP75247.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
transporter AF_0266
SCNpilot_expt_1000_bf_scaffold_1268_15
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14461..15048)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000318F68D
Uncharacterized protein {ECO:0000313|EMBL:KDP75249.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
dhaR; HTH-type transcriptional repressor dhaR
SCNpilot_expt_1000_bf_scaffold_1268_16
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15198..15641)
DNA (444bp) protein (148aa)
ATPase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000369ED95
hypothetical protein
Bll3153 protein {ECO:0000313|EMBL:BAC48418.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCNpilot_expt_1000_bf_scaffold_1268_17
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15748..16158)
DNA (411bp) protein (137aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
UPI0003CE2BED related cluster n=1 Tax=unknown RepID=UPI0003CE2BED
alkylhydroperoxidase like protein
SCNpilot_expt_1000_bf_scaffold_1268_18
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16233..17423)
DNA (1191bp) protein (397aa)
UPI0003CF128F related cluster n=1 Tax=unknown RepID=UPI0003CF128F
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESY70048.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
ABC-type sugar transport system, ATPase component
SCNpilot_expt_1000_bf_scaffold_1268_19
unknown

Not on your lists

18014..18748
DNA (735bp) protein (245aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1268_20
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18742..20865)
DNA (2124bp) protein (708aa)
Sugar ABC transporter permease n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5QF62_9RHIZ rbh
Permease protein of sugar ABC transporter {ECO:0000313|EMBL:CDX59717.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
sugar ABC transporter permease; K02057 simple sugar transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_1268_21
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21062..21394)
DNA (333bp) protein (111aa)
Binding protein component of sugar ABC transporter n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YDI7_MESOW
binding protein component of sugar ABC transporter
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESY63692.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
Displaying 21 items

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