name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1297_1
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..681
|
Putative periplasmic protein n=1 Tax=Rhizobium sp. AP16 RepID=J2WHH0_9RHIZ
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:KEA06492.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1297_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(692..1045)
|
hypothetical protein n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI000360E5CF
Uncharacterized protein {ECO:0000313|EMBL:EYR77796.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1297_3
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1121..2848)
|
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JX74_AGRVS
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:ACM36852.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
|
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SCNpilot_expt_1000_bf_scaffold_1297_4
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3052..4068
|
Glycosyltransferase protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JX72_AGRVS
glycosyltransferase
Glycosyltransferase protein {ECO:0000313|EMBL:ACM36850.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
|
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SCNpilot_expt_1000_bf_scaffold_1297_5
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4103..5116)
|
metH; methionine synthase I; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
methionine synthase n=1 Tax=Rhizobium giardinii RepID=UPI00036916C3
rbh
Cobalamin-dependent methionine synthase I {ECO:0000313|EMBL:EJK82122.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1297_6
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5257..6303)
|
putative ABC transporter ATP-binding protein; K02000 glycine betaine/proline transport system ATP-binding protein [EC:3.6.3.32]
rbh
Glycine betaine/L-proline ABC transporter, ATPase subunit n=8 Tax=Rhizobium meliloti RepID=F6BPB8_SINMB
rbh
Putative ABC-transporter ATP-binding protein {ECO:0000313|EMBL:AGG74553.1}; TaxID=1286640 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain Sm2011 / Rm2011 / 2011).;"
|
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SCNpilot_expt_1000_bf_scaffold_1297_7
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6296..7204)
|
ABC-type proline/glycine betaine transport system, permease component n=1 Tax=Rhizobium sp. AP16 RepID=J2WHG5_9RHIZ
ABC transporter permease {ECO:0000313|EMBL:KDP76339.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
QAT familiy ABC transporter, permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_1297_8
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7449..8444)
|
ABC-type glycine betaine transport, periplasmic subunit n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FBP0_9RHIZ
rbh
ABC-type glycine betaine transport, periplasmic subunit {ECO:0000313|EMBL:EHS49780.1}; Flags: Precursor;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
QAT familiy ABC transporter, periplasmic substrate-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_1297_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9284..9427)
|
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN59_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB71510.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1297_10
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9677..11140
|
Cobyric acid synthase n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A7M0_RHIFH
rbh
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1297_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11798..12325
|
Bifunctional adenosylcobalamin biosynthesis protein CobP n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJU3_RHITR
cobP; bifunctional adenosylcobalamin biosynthesis protein CobP
Bifunctional adenosylcobalamin biosynthesis protein CobP {ECO:0000313|EMBL:AGB71507.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1297_12
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12330..13379
|
Cobalamin biosynthesis protein CobW n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JGD0_AGRRK
rbh
cobW; cobalamin biosynthesis protein CobW; K02234 cobalamin biosynthesis protein CobW
rbh
Cobalamin biosynthesis protein CobW {ECO:0000313|EMBL:KEA06503.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1297_13
unknown
|
Not on your lists |
comp(13318..14463)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1297_14
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14770..16092)
|
DNA-binding response regulator, LuxR family n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1TDG2_9BURK
DNA-binding response regulator, LuxR family {ECO:0000313|EMBL:EDT38400.1}; TaxID=396597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria MEX-5.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1297_15
unknown
|
Not on your lists |
comp(16291..16794)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1297_16
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17234..17860
|
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:CDM57778.1}; EC=2.5.1.17 {ECO:0000313|EMBL:CDM57778.1};; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17); K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17]
Cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q0T7_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_1297_17
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17860..18285
|
Uncharacterized protein n=1 Tax=Ensifer adhaerens RepID=I0FXH6_ENSAD
Uncharacterized protein {ECO:0000313|EMBL:BAL73213.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
hypothetical protein; K08978 putative membrane protein
|
|
SCNpilot_expt_1000_bf_scaffold_1297_18
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18282..18650)
|
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F5R6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EHS51909.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein; K07090
|
|
SCNpilot_expt_1000_bf_scaffold_1297_19
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19152..19580
|
cobE; precorrin-3B C17-methyltransferase (EC:2.1.1.131); K05934 precorrin-3B C17-methyltransferase [EC:2.1.1.131]
Precorrin-3B C17-methyltransferase n=1 Tax=Rhizobium sp. CCGE 510 RepID=J4TCF6_9RHIZ
Precorrin-3B C17-methyltransferase {ECO:0000313|EMBL:EJT05622.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1297_20
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19707..20666
|
iunH; inosine-uridine preferring nucleoside hydrolase (EC:3.2.2.-)
rbh
Inosine-uridine preferring nucleoside hydrolase n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8A9P0_RHIRD
rbh
Nucleoside hydrolase {ECO:0000313|EMBL:KJF65167.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1297_21
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20907..21749
|
cobA; uroporphyrin-III C-methyltransferase; K02303 uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
rbh
Uroporphyrin-III C-methyltransferase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JGC1_AGRRK
rbh
Uroporphyrin-III methyltransferase {ECO:0000313|EMBL:KEA06511.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1297_22
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21746..23053
|
Hydrogenobyrinate a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; EC=6.3.5.9 {ECO:0000256|HAMAP-Rule:MF_00027};; Hydrogenobyrinic acid a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
cobB; cobyrinic acid a,c-diamide synthase (EC:6.3.5.9); K02224 cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
rbh
Cobyrinic acid A,C-diamide synthase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VUP0_RHILT
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1297_23
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23050..25017
|
cobD; cobalamin biosynthesis protein (EC:6.3.1.10); K02227 adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
rbh
Cobalamin biosynthesis protein CobD n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HHF0_9RHIZ
rbh
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
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|
SCNpilot_expt_1000_bf_scaffold_1297_24
Yersinia aldovae, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25216..26670
|
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI000365556C
Anthrax toxin LF subunit {ECO:0000313|EMBL:AJJ62231.1}; TaxID=1453495 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia aldovae 670-83.;"
anthrax toxin LF subunit
|
|
SCNpilot_expt_1000_bf_scaffold_1297_25
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26934..27362
|
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0C9D3_RHILT
Uncharacterized protein {ECO:0000313|EMBL:EJC79672.1}; Flags: Precursor;; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
L,D-transpeptidase domain-containing protein
|
|
SCNpilot_expt_1000_bf_scaffold_1297_26
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27406..27666)
|
Transcriptional regulator, Crp family n=2 Tax=Agrobacterium RepID=F0L594_AGRSH
fnrL; Crp family transcriptional regulator; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Putative FNR family transcriptional regulator {ECO:0000313|EMBL:AHK01450.1}; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens LBA4213 (Ach5).;"
|
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SCNpilot_expt_1000_bf_scaffold_1297_27
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27650..28102)
|
Putative transcriptional activator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CPC1_9RHIZ
Putative transcriptional activator {ECO:0000313|EMBL:EYR80643.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
transcriptional regulator protein, Fnr/CRP family; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein
|
|
SCNpilot_expt_1000_bf_scaffold_1297_28
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28274..29623
|
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;"
hemN; coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]
rbh
Coproporphyrinogen-III oxidase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QWL5_9RHIZ
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1297_29
Rhizobium lupini, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29729..30007
|
Acyl carrier protein n=5 Tax=Rhizobium/Agrobacterium group RepID=G6XPE3_RHIRD
Acyl carrier protein {ECO:0000313|EMBL:EKJ97079.1}; TaxID=1229491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium lupini HPC(L).;"
acpP; acyl carrier protein
|
|
SCNpilot_expt_1000_bf_scaffold_1297_30
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30023..30499
|
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]
(3R)-hydroxymyristoyl-ACP dehydratase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HJS6_9RHIZ
3-hydroxyacyl-ACP dehydratase {ECO:0000313|EMBL:KGE00666.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
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