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SCNpilot_expt_1000_bf_scaffold_1415

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1415_1
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29..679
DNA (651bp) protein (217aa)
dhe; haloacid dehalogenase; K01560 2-haloacid dehalogenase [EC:3.8.1.2] rbh
Haloacid dehalogenase, type II n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A271_RHIFH rbh
Haloacid dehalogenase {ECO:0000313|EMBL:KDP76024.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
SCNpilot_expt_1000_bf_scaffold_1415_2
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

700..1470
DNA (771bp) protein (257aa)
Trans-aconitate 2-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00560, ECO:0000256|SAAS:SAAS00012147}; EC=2.1.1.144 {ECO:0000256|HAMAP-Rule:MF_00560, ECO:0000256|SAAS:SAAS00012147};; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
trans-aconitate 2-methyltransferase; K00598 trans-aconitate 2-methyltransferase [EC:2.1.1.144] rbh
Trans-aconitate 2-methyltransferase n=1 Tax=Rhizobium sp. CF122 RepID=J3BTA1_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_1415_3
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1544..2686)
DNA (1143bp) protein (381aa)
Secreted protease C {ECO:0000313|EMBL:KFC63188.1}; EC=3.4.24.- {ECO:0000313|EMBL:KFC63188.1};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TAR9_RICCO
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1415_4
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2896..3291)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0W2F4_RHILT
Uncharacterized protein {ECO:0000313|EMBL:EJC79906.1}; Flags: Precursor;; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1415_5
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3506..5071
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0P0Z4_RHIML
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EHK73749.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
SCNpilot_expt_1000_bf_scaffold_1415_6
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5302..5958)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HGC4_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:AJD46175.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1415_7
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6844..7311
DNA (468bp) protein (156aa)
UPI0003CDF045 related cluster n=1 Tax=unknown RepID=UPI0003CDF045
Transposase IS4 {ECO:0000313|EMBL:ESW92761.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
transposase IS4 family protein
SCNpilot_expt_1000_bf_scaffold_1415_8
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7870..9387
DNA (1518bp) protein (506aa)
ABC transporter n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HKG2_9RHIZ rbh
ABC transporter {ECO:0000313|EMBL:EPE99282.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
ABC transporter ATP-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_1415_9
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9453..10232)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NC71_RHISP rbh
Uncharacterized protein {ECO:0000313|EMBL:KEQ05191.1}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;"
L,D-transpeptidase domain-containing protein
SCNpilot_expt_1000_bf_scaffold_1415_10
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10505..11164)
DNA (660bp) protein (220aa)
glutathione S-transferase; K00799 glutathione S-transferase [EC:2.5.1.18] rbh
Glutathione S-transferase n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0GAC7_RHIML rbh
Glutathione S-transferase {ECO:0000313|EMBL:EHK73743.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
SCNpilot_expt_1000_bf_scaffold_1415_11
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11330..12694)
DNA (1365bp) protein (455aa)
Tat protein n=1 Tax=Rhizobium gallicum RepID=UPI00036A3965 rbh
Uncharacterized protein {ECO:0000313|EMBL:KEC75993.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. phaseoli CCGM1.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1415_12
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12959..15265
DNA (2307bp) protein (769aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VLR9_RHILT rbh
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJC73763.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase rbh
SCNpilot_expt_1000_bf_scaffold_1415_13
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15389..16399
DNA (1011bp) protein (337aa)
Putative exonuclease, DNA ligase-associated n=1 Tax=Rhizobium sp. CF080 RepID=J3BSY6_9RHIZ rbh
Putative exonuclease, DNA ligase-associated {ECO:0000313|EMBL:EUB95393.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
exonuclease DNA ligase-associated protein rbh
SCNpilot_expt_1000_bf_scaffold_1415_14
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16647..18272
DNA (1626bp) protein (542aa)
ATP-dependent DNA ligase protein {ECO:0000313|EMBL:AIC26382.1}; EC=6.5.1.1 {ECO:0000313|EMBL:AIC26382.1};; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1] rbh
ATP-dependent DNA ligase n=1 Tax=Rhizobium phaseoli RepID=UPI0002D9420A rbh
SCNpilot_expt_1000_bf_scaffold_1415_15
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18479..19207
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B3ECD7
L,D-transpeptidase domain-containing protein {ECO:0000313|EMBL:AJD40446.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1415_16
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19272..19754)
DNA (483bp) protein (161aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. AP16 RepID=J2WCT0_9RHIZ
transcriptional regulator protein
Transcriptional regulator {ECO:0000313|EMBL:EJK80455.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
SCNpilot_expt_1000_bf_scaffold_1415_17
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19875..20297
DNA (423bp) protein (141aa)
Organic hydroperoxide resistance protein n=4 Tax=Rhizobium/Agrobacterium group RepID=U4Q5B6_9RHIZ
ohr1; organic hydroperoxide resistance protein
Organic hydroperoxide resistance protein {ECO:0000313|EMBL:KAJ34510.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
SCNpilot_expt_1000_bf_scaffold_1415_18
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20579..21640
DNA (1062bp) protein (354aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V531_9RHIZ
3-deoxy-7-phosphoheptulonate synthase
SCNpilot_expt_1000_bf_scaffold_1415_19
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21773..22330)
DNA (558bp) protein (186aa)
transposase ISRSO1 n=1 Tax=Methylocystis parvus RepID=UPI000366D5AF
Isrso1-transposase
Isrso1-transposase protein {ECO:0000313|EMBL:ADZ68929.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_expt_1000_bf_scaffold_1415_20
unknown

Not on your lists

comp(22668..22937)
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1415_21
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23031..23501)
DNA (471bp) protein (157aa)
Beta-lactamase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P6D7_AZOS1
Beta-lactamase {ECO:0000313|EMBL:KDP73057.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
beta-lactamase
SCNpilot_expt_1000_bf_scaffold_1415_22
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23754..24857)
DNA (1104bp) protein (368aa)
spermidine/putrescine ABC transporter ATP-binding protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00037C5FEC rbh
Spermidine/putrescine ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AHK45266.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
potA; spermidine/putrescine transport system ATP-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_1415_23
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24854..25645)
DNA (792bp) protein (264aa)
ABC-type spermidine/putrescine transport system, permease component II n=1 Tax=Rhizobium sp. CF122 RepID=J3BFF3_9RHIZ rbh
ABC-type spermidine/putrescine transport system, permease component II {ECO:0000313|EMBL:EJL49674.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
potC; spermidine/putrescine transport system permease protein; K11070 spermidine/putrescine transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_1415_24
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25648..26511)
DNA (864bp) protein (288aa)
spermidine/putrescine ABC transporter permease n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000376FA53
Putrescine ABC transport system permease protein PotH {ECO:0000313|EMBL:AHK45268.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
potB; spermidine/putrescine transport system permease protein
SCNpilot_expt_1000_bf_scaffold_1415_25
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26804..27886)
DNA (1083bp) protein (361aa)
Spermidine/putrescine transport system substrate-binding protein n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PPG4_9RHIZ
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDP73061.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
potD; spermidine/putrescine transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_1415_26
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27976..28596
DNA (621bp) protein (207aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF122 RepID=J3BE72_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EJL49671.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1415_27
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28631..29026
DNA (396bp) protein (132aa)
ketosteroid isomerase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00037E6B86
Uncharacterized protein {ECO:0000313|EMBL:CCM78509.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1415_28
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29187..30614
DNA (1428bp) protein (476aa)
Mannose-1-phosphate guanyltransferase {ECO:0000313|EMBL:KEQ09779.1}; EC=2.7.7.13 {ECO:0000313|EMBL:KEQ09779.1};; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JA96_AGRRK
SCNpilot_expt_1000_bf_scaffold_1415_29
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30933..31550
DNA (618bp) protein (206aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J2QSE5_9RHIZ
UidR transriptional regulator {ECO:0000313|EMBL:CDN49275.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
TetR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1415_30
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31550..32527
DNA (978bp) protein (326aa)
multidrug transporter n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000377B554 rbh
Secretion protein HlyD family protein {ECO:0000313|EMBL:CDN49276.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
efflux protein; K01993 HlyD family secretion protein
Displaying items 1-30 of 38 in total

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