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SCNpilot_expt_1000_bf_scaffold_1769

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1769_1
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..947)
DNA (945bp) protein (315aa)
aminotransferase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030964C7
Aminotransferase {ECO:0000313|EMBL:EWY39103.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
aspartate aminotransferase
SCNpilot_expt_1000_bf_scaffold_1769_2
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(978..2324)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=2 Tax=Bordetella bronchiseptica RepID=K0MWK7_BORBM rbh
MmgE/PrpD family protein {ECO:0000313|EMBL:KDR42779.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1769_3
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2327..3235)
DNA (909bp) protein (303aa)
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60) rbh
Putative 2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:CCN24633.1}; EC=1.1.1.60 {ECO:0000313|EMBL:CCN24633.1};; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
Putative 2-hydroxy-3-oxopropionate reductase n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QJV2_BORBO rbh
SCNpilot_expt_1000_bf_scaffold_1769_4
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3281..4060)
DNA (780bp) protein (260aa)
D-beta-hydroxybutyrate dehydrogenase (BDH) (3-hydroxybutyrate dehydrogenase) (3-HBDH) {ECO:0000313|EMBL:CCE06789.1}; EC=1.1.1.30 {ECO:0000313|EMBL:CCE06789.1};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
D-beta-hydroxybutyrate dehydrogenase; K00019 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
cytochrome C biogenesis protein CcmE n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036B1E5F
SCNpilot_expt_1000_bf_scaffold_1769_5
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4057..4893)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QQJ5_BORBO rbh
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:KCV61752.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1769_6
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5117..5509
DNA (393bp) protein (131aa)
pcaC; 4-carboxymuconolactone decarboxylase (EC:4.1.1.44)
4-carboxymuconolactone decarboxylase n=34 Tax=Bordetella RepID=F4L9U8_BORPC
Putative 4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:KCV61734.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
SCNpilot_expt_1000_bf_scaffold_1769_7
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5580..7067
DNA (1488bp) protein (496aa)
hypothetical protein n=1 Tax=Erwinia toletana RepID=UPI0003484139 rbh
4-hydroxyphenylacetate 3-monooxygenase {ECO:0000313|EMBL:KGB82658.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22.;"
4-hydroxyphenylacetate 3-hydroxylase rbh
SCNpilot_expt_1000_bf_scaffold_1769_8
Paenirhodobacter enshiensis, Paenirhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7182..7586
DNA (405bp) protein (135aa)
Putative uncharacterized protein npdX n=1 Tax=Arthrobacter sp. NyZ415 RepID=D0V103_9MICC
Uncharacterized protein {ECO:0000313|EMBL:KFI24433.1}; TaxID=1105367 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paenirhodobacter.;" source="Paenirhodobacter enshiensis.;"
protein of unknown function DUF1486
SCNpilot_expt_1000_bf_scaffold_1769_9
Paenirhodobacter enshiensis, Paenirhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7593..9035
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Erwinia toletana RepID=UPI00034A96D9 rbh
6-aminohexanoate hydrolase {ECO:0000313|EMBL:KFI24432.1}; TaxID=1105367 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paenirhodobacter.;" source="Paenirhodobacter enshiensis.;"
amidase family protein
SCNpilot_expt_1000_bf_scaffold_1769_10
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9047..10348
DNA (1302bp) protein (434aa)
amidase (EC:6.3.5.-)
hypothetical protein n=1 Tax=Erwinia toletana RepID=UPI00034B0482 rbh
Tax=RBG_16_Betaproteobacteria_66_20_curated
SCNpilot_expt_1000_bf_scaffold_1769_11
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10345..10878
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Erwinia toletana RepID=UPI00034AC0B8
Uncharacterized protein {ECO:0000313|EMBL:KGB81500.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22.;"
nitrilotriacetate monooxygenase component B protein
SCNpilot_expt_1000_bf_scaffold_1769_12
Paenirhodobacter enshiensis, Paenirhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10915..11958
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Erwinia toletana RepID=UPI00034B1C25 rbh
2,5-dihydroxypyridine 5,6-dioxygenase {ECO:0000313|EMBL:KFI24460.1}; TaxID=1105367 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paenirhodobacter.;" source="Paenirhodobacter enshiensis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1769_13
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11969..13129
DNA (1161bp) protein (387aa)
UPI0003CFEC9C related cluster n=1 Tax=unknown RepID=UPI0003CFEC9C rbh
Pyridoxine 4-oxidase {ECO:0000313|EMBL:ESZ20815.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
glucose-methanol-choline oxidoreductase
SCNpilot_expt_1000_bf_scaffold_1769_14
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13126..13500
DNA (375bp) protein (125aa)
pyridoxine 4-oxidase n=1 Tax=Rhizobium loti RepID=UPI000379C78F
Pyridoxine 4-oxidase {ECO:0000313|EMBL:KGB81497.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22.;"
choline dehydrogenase-like flavoprotein
Displaying 14 items

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