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SCNpilot_expt_1000_bf_scaffold_1826

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1826_1
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..808
DNA (807bp) protein (269aa)
gyaR; glyoxylate reductase (EC:1.1.1.26); K00015 glyoxylate reductase [EC:1.1.1.26]
2-hydroxyacid dehydrogenase n=1 Tax=Rhizobium leguminosarum RepID=UPI00035D08C9
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:AHF86393.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
SCNpilot_expt_1000_bf_scaffold_1826_2
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1003..1770)
DNA (768bp) protein (256aa)
Molybdopterin biosynthesis protein 3 n=1 Tax=Rhizobium freirei PRF 81 RepID=N6URV8_9RHIZ
Molybdopterin biosynthesis protein 3 {ECO:0000313|EMBL:ENN84450.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
moeB; molybdopterin biosynthesis protein MoeB rbh
SCNpilot_expt_1000_bf_scaffold_1826_3
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1816..2940)
DNA (1125bp) protein (375aa)
recombinase RecF n=1 Tax=Rhizobium leguminosarum RepID=UPI000377231A
recF; recombination protein F; K03629 DNA replication and repair protein RecF
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
SCNpilot_expt_1000_bf_scaffold_1826_4
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3027..4595)
DNA (1569bp) protein (523aa)
Phytoene dehydrogenase-like oxidoreductase n=1 Tax=Rhizobium sp. CF080 RepID=J3CL71_9RHIZ rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:EUC01169.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
FAD dependent oxidoreductase rbh
SCNpilot_expt_1000_bf_scaffold_1826_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4872..5750
DNA (879bp) protein (293aa)
Cyclase family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LLF5_RHITR
cyclase family protein
Cyclase family protein {ECO:0000313|EMBL:AGB72218.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_1826_6
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6013..7599
DNA (1587bp) protein (529aa)
Phytoene dehydrogenase-like oxidoreductase n=1 Tax=Rhizobium sp. CF080 RepID=J3C9T0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EUC01167.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
FAD dependent oxidoreductase
SCNpilot_expt_1000_bf_scaffold_1826_7
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7624..8130
DNA (507bp) protein (169aa)
Transcriptional regulator, MarR family n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V2E1_9RHIZ
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ENN87226.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
transcriptional regulator, MarR family
SCNpilot_expt_1000_bf_scaffold_1826_8
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8191..9012)
DNA (822bp) protein (274aa)
Putative endonuclease/exonuclease/phosphatase protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3Q1G2_RHIE6 rbh
endonuclease/exonuclease/phosphatase; K06896 rbh
Putative endonuclease/exonuclease/phosphatase protein {ECO:0000313|EMBL:ACE93518.1}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;"
SCNpilot_expt_1000_bf_scaffold_1826_9
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9030..9389)
DNA (360bp) protein (120aa)
phospholipase D/transphosphatidylase; K06131 cardiolipin synthase [EC:2.7.8.-]
UPI0003CFACCC related cluster n=1 Tax=unknown RepID=UPI0003CFACCC
Phospholipase D/transphosphatidylase {ECO:0000313|EMBL:CDX62638.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCNpilot_expt_1000_bf_scaffold_1826_10
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9445..10500)
DNA (1056bp) protein (352aa)
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase n=1 Tax=Rhizobium sp. CF080 RepID=J3C9M9_9RHIZ
Phospholipase D-like domain containing protein {ECO:0000313|EMBL:EUC00067.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
cls; cardiolipin synthetase
SCNpilot_expt_1000_bf_scaffold_1826_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10681..12372)
DNA (1692bp) protein (564aa)
Peroxisomal bifunctional enzyme n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LLW7_RHITR
peroxisomal bifunctional enzyme
Peroxisomal bifunctional enzyme {ECO:0000313|EMBL:AGB72237.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_1826_12
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12360..12662)
DNA (303bp) protein (101aa)
3-hydroxyacyl-CoA dehydrogenase; K07516 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
Enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U3P6_9RHIZ
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:KGD87325.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
SCNpilot_expt_1000_bf_scaffold_1826_13
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12676..13071)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NLQ6_RHISP
Endoribonuclease L-PSP {ECO:0000313|EMBL:KEQ10426.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
endoribonuclease L-PSP
SCNpilot_expt_1000_bf_scaffold_1826_14
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13049..13477)
DNA (429bp) protein (143aa)
Thioesterase family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LQ74_RHITR
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:KDP74267.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
thioesterase family protein
SCNpilot_expt_1000_bf_scaffold_1826_15
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13491..14639)
DNA (1149bp) protein (383aa)
gcdH; glutaryl-CoA dehydrogenase; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7]
Acyl-CoA dehydrogenase n=1 Tax=Rhizobium sp. AP16 RepID=J2L150_9RHIZ
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EJK81056.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
SCNpilot_expt_1000_bf_scaffold_1826_16
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14656..15831)
DNA (1176bp) protein (392aa)
Putative acyl-CoA dehydrogenase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V016_9RHIZ
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:ENN87240.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
acyl-CoA dehydrogenase
SCNpilot_expt_1000_bf_scaffold_1826_17
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15836..16678)
DNA (843bp) protein (281aa)
Putative Enoyl-CoA hydratase n=1 Tax=Rhizobium sp. RepID=L0NKV9_RHISP rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:CDN50049.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
enoyl-CoA hydratase/isomerase
SCNpilot_expt_1000_bf_scaffold_1826_18
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16836..17282)
DNA (447bp) protein (149aa)
cupin n=1 Tax=Hoeflea sp. 108 RepID=UPI00035E4B8E
Cupin {ECO:0000313|EMBL:KGD87330.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
cupin
SCNpilot_expt_1000_bf_scaffold_1826_19
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17382..18173)
DNA (792bp) protein (264aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3H4S0_9RHIZ
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EPE94057.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_expt_1000_bf_scaffold_1826_20
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18184..20505)
DNA (2322bp) protein (774aa)
Salicylyl-CoA 5-hydroxylase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HKT3_9RHIZ rbh
Salicylyl-CoA 5-hydroxylase {ECO:0000313|EMBL:EPE94056.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
2-amninobenzoyl-CoA monooxygenase/reductase rbh
SCNpilot_expt_1000_bf_scaffold_1826_21
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20739..21842)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3H5N7_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EPE94054.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1826_22
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21980..22522
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3I2S3_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EPE94053.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1826_23
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22530..23132)
DNA (603bp) protein (201aa)
glyoxalase n=1 Tax=Rhizobium loti RepID=UPI00036E576E
Glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein {ECO:0000313|EMBL:AID34244.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_expt_1000_bf_scaffold_1826_24
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23231..24049)
DNA (819bp) protein (273aa)
ABC transporter ATP-binding protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U3N5_9RHIZ rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENN87234.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
ABC transporter, ATP-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_1826_25
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24065..24925)
DNA (861bp) protein (287aa)
ABC transporter, ATP-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LND6_RHITR rbh
ABC transporter, ATP-binding protein rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGB72226.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_1826_26
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24922..25815)
DNA (894bp) protein (298aa)
ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LQ66_RHITR rbh
ABC transporter, permease protein rbh
ABC transporter, permease protein {ECO:0000313|EMBL:AGB72225.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_1826_27
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25808..26815)
DNA (1008bp) protein (336aa)
ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LQ42_RHITR
ABC transporter, permease protein
ABC transporter, permease protein {ECO:0000313|EMBL:AGB72224.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_1826_28
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27212..28747)
DNA (1536bp) protein (512aa)
Family 5 extracellular solute-binding protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3I2R6_9RHIZ rbh
Family 5 extracellular solute-binding protein {ECO:0000313|EMBL:EPE94048.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
ABC transporter, substrate-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_1826_29
Mesorhizobium sp. LSHC414A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28909..30975)
DNA (2067bp) protein (689aa)
UPI0003CEDBBB related cluster n=1 Tax=unknown RepID=UPI0003CEDBBB
Uncharacterized protein {ECO:0000313|EMBL:ESX73494.1}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC414A00.;"
SCNpilot_expt_1000_bf_scaffold_1826_30
unknown

Not on your lists

comp(31439..31825)
DNA (387bp) protein (129aa)

This feature has no annotations

Displaying items 1-30 of 42 in total

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