name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_3127_1
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2..580
|
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
murB; UDP-N-acetylenolpyruvoylglucosamine reductase; K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158]
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Rhizobium giardinii RepID=UPI0003780B78
|
|
SCNpilot_expt_1000_bf_scaffold_3127_2
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(594..1166)
|
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003616B72
Uncharacterized protein {ECO:0000313|EMBL:CDM58383.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_3127_3
unknown
|
Not on your lists |
1538..1687
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3127_4
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1753..3051)
|
Metabolite-proton symporter n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HX44_9RHIZ
rbh
Metabolite-proton symporter {ECO:0000313|EMBL:EPE97691.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
yhjE; putative transporter
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3127_5
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3509..4429
|
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
D-alanine--D-alanine ligase n=1 Tax=Rhizobium giardinii RepID=UPI00038258D3
|
|
SCNpilot_expt_1000_bf_scaffold_3127_6
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4417..5352
|
Cell division protein FtsQ n=1 Tax=Rhizobium sp. IRBG74 RepID=U4Q5P4_9RHIZ
rbh
Cell division protein FtsQ {ECO:0000256|HAMAP-Rule:MF_00911, ECO:0000256|SAAS:SAAS00006985}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
ftsQ; Cell division protein FtsQ
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3127_7
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5400..5900)
|
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U547_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN87739.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3127_8
Rhizobium lupini, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6737..8533
|
Cell division protein FtsZ n=1 Tax=Rhizobium lupini HPC(L) RepID=K5DVV2_RHILU
rbh
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1229491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium lupini HPC(L).;"
ftsZ2; cell division protein FtsZ
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3127_9
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8805..9761
|
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041386};; UDP-3-O-acyl-GlcNAc deacetylase {ECO:0000256|HAMAP-Rule:MF_00388}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrob
UDP-3-0-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase n=2 Tax=Agrobacterium RepID=Q7CXW9_AGRT5
|
|
SCNpilot_expt_1000_bf_scaffold_3127_10
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10046..10348
|
Outer membrane protein assembly factor BamD n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JH41_AGRRK
hypothetical protein; K05807 putative lipoprotein
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3127_11
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10844..12517
|
DNA repair protein RecN n=1 Tax=Rhizobium sp. AP16 RepID=J2L4F2_9RHIZ
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
recN; DNA repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N)
|
|
SCNpilot_expt_1000_bf_scaffold_3127_12
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12628..14787
|
DNA ligase {ECO:0000255|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000255|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000255|HAMAP-Rule:MF_01588}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;"
DNA ligase n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=DNLJ_RHIE6
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3127_13
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14756..15340
|
CREA protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B2E5CA
CreA family protein; K05805 CreA protein
Uncharacterized protein {ECO:0000313|EMBL:EJC75691.1}; Flags: Precursor;; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3127_14
unknown
|
Not on your lists |
comp(15604..16017)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3127_15
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16209..16673)
|
Chemotaxis protein CheW n=2 Tax=Rhizobium fredii RepID=G9A899_RHIFH
putative chemotaxis protein; K03408 purine-binding chemotaxis protein CheW
Chemotaxis protein CheW {ECO:0000313|EMBL:CCE96479.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
|
|
SCNpilot_expt_1000_bf_scaffold_3127_16
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16676..18637)
|
Methyl-accepting chemotaxis protein n=1 Tax=Rhizobium sp. CF080 RepID=J3BA92_9RHIZ
rbh
Methyl-accepting chemotaxis protein McpU {ECO:0000313|EMBL:CDN48333.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
mcpW; methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein
|
|
SCNpilot_expt_1000_bf_scaffold_3127_17
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18877..19488
|
Sco copper chaperone family protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003728A03
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:EYR77772.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
senC; putative cytochrome C oxidase assembly factor; K07152
|
|
SCNpilot_expt_1000_bf_scaffold_3127_18
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19579..20457
|
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
prmA; ribosomal protein L11 methyltransferase; K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]
ribosomal protein L11 methyltransferase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037E909F
|
|
SCNpilot_expt_1000_bf_scaffold_3127_19
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20949..22802
|
X-Pro aminopeptidase n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI0003730E9C
rbh
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:EJJ30535.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3127_20
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22795..23106)
|
Branched-chain amino acid transport n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F6L9_9RHIZ
Branched-chain amino acid transport {ECO:0000313|EMBL:EHS51583.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_3127_21
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23111..23827)
|
branched-chain amino acid ABC transporter permease n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00035C7BAE
rbh
AzlC family protein
rbh
Branched-chain amino acid permease (Azaleucine resistance) protein {ECO:0000313|EMBL:KEC77733.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3127_22
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23950..24201
|
hypothetical protein n=1 Tax=Rhizobium phaseoli RepID=UPI000308B70D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGE61448.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3127_23
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24406..25227)
|
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V3P5_9RHIZ
rbh
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3127_24
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25229..26104)
|
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247611};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247610}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;"
panC; pantoate--beta-alanine ligase; K01918 pantoate--beta-alanine ligase [EC:6.3.2.1]
Pantothenate synthetase n=1 Tax=Rhizobium sp. AP16 RepID=J2WH90_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_3127_25
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26363..26989)
|
Nicotinamidase-like amidase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VQV1_RHILT
rbh
PncA {ECO:0000313|EMBL:KJF73924.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3127_26
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27142..27375
|
Amidase {ECO:0000313|EMBL:KGD95001.1}; EC=3.5.1.4 {ECO:0000313|EMBL:KGD95001.1};; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
Putative amidase n=1 Tax=Rhodococcus erythropolis (strain PR4 / NBRC 100887) RepID=C0ZU87_RHOE4
|
|
SCNpilot_expt_1000_bf_scaffold_3127_27
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27351..28559
|
Amidase {ECO:0000313|EMBL:KGD95001.1}; EC=3.5.1.4 {ECO:0000313|EMBL:KGD95001.1};; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit n=1 Tax=Rhizobium sp. CF080 RepID=J3CXC8_9RHIZ
rbh
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3127_28
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29244..30275
|
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00035FF6E0
Uncharacterized protein {ECO:0000313|EMBL:EUB96167.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_3127_29
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30310..32799)
|
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
pcrA; DNA helicase II (EC:3.6.1.-); K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
rbh
DNA helicase II n=1 Tax=Rhizobium sp. RepID=L0NG32_RHISP
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3127_30
unknown
|
Not on your lists |
comp(32889..33302)
|
This feature has no annotations |