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SCNpilot_expt_1000_bf_scaffold_3272

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3272_1
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..407
DNA (405bp) protein (135aa)
HAS barrel domain-containing protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LLM2_RHITR
HAS barrel domain-containing protein
HAS barrel domain-containing protein {ECO:0000313|EMBL:AGB71586.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_3272_2
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1288..2178
DNA (891bp) protein (297aa)
serB; phosphoserine phosphatase (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3]
Phosphoserine phosphatase SerB n=1 Tax=Rhizobium sp. CF122 RepID=J3BE33_9RHIZ
Phosphoserine phosphatase SerB {ECO:0000313|EMBL:EJL48934.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
SCNpilot_expt_1000_bf_scaffold_3272_3
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2208..2531
DNA (324bp) protein (108aa)
GCN5-related N-acetyltransferase n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F2N9_9RHIZ
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EHS53080.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
acetyltransferase
SCNpilot_expt_1000_bf_scaffold_3272_4
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2528..2776
DNA (249bp) protein (83aa)
UPI0003CE6BC1 related cluster n=1 Tax=unknown RepID=UPI0003CE6BC1
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADV12351.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_3272_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2797..4350)
DNA (1554bp) protein (518aa)
serine protease; K01362 [EC:3.4.21.-] rbh
serine protease n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00035FE248 rbh
Periplasmic serine protease, Do/DeqQ family {ECO:0000313|EMBL:EJC67240.1}; Flags: Precursor;; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
SCNpilot_expt_1000_bf_scaffold_3272_6
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4541..5485)
DNA (945bp) protein (315aa)
putative transmembrane serine protease; K04087 membrane protease subunit HflC [EC:3.4.-.-] rbh
Protein HflC n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MEC1_RHISN rbh
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
SCNpilot_expt_1000_bf_scaffold_3272_7
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5482..6582)
DNA (1101bp) protein (367aa)
HflK protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F2P4_9RHIZ rbh
HflK protein {ECO:0000313|EMBL:EHS53085.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hflK; membrane bound protease rbh
SCNpilot_expt_1000_bf_scaffold_3272_8
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6725..7249)
DNA (525bp) protein (175aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
folA; dihydrofolate reductase; K00287 dihydrofolate reductase [EC:1.5.1.3]
Dihydrofolate reductase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V3M4_9RHIZ
SCNpilot_expt_1000_bf_scaffold_3272_9
unknown

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7468..9165
DNA (1698bp) protein (566aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3272_10
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9169..9963)
DNA (795bp) protein (265aa)
thyA; thymidylate synthase (EC:2.1.1.45); K00560 thymidylate synthase [EC:2.1.1.45] rbh
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens LBA4213 (Ach5).;"
PREDICTED: thymidylate synthase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C15463 rbh
SCNpilot_expt_1000_bf_scaffold_3272_11
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10070..10381)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U8B1_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:KDP75105.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
hypothetical protein
Displaying 11 items

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