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SCNpilot_expt_1000_bf_scaffold_3760

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3760_1
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..292)
DNA (291bp) protein (97aa)
Na(+)/H(+) antiporter subunit C n=1 Tax=Rhizobium sp. RepID=L0NBW1_RHISP
Monovalent cation/H+ antiporter subunit C {ECO:0000313|EMBL:KGD85847.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
mnhC; monovalent cation/H+ antiporter subunit C; K05567 multicomponent Na+:H+ antiporter subunit C
SCNpilot_expt_1000_bf_scaffold_3760_2
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(292..711)
DNA (420bp) protein (140aa)
Putative Na(+)/H(+) antiporter subunit n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U7E3_9RHIZ
Putative Na(+)/H(+) antiporter subunit {ECO:0000313|EMBL:ENN86188.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
phaB; Na(+)/H(+) antiporter subunit B
SCNpilot_expt_1000_bf_scaffold_3760_3
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(716..3049)
DNA (2334bp) protein (778aa)
cation:proton antiporter n=1 Tax=Rhizobium radiobacter RepID=UPI0003746C07 rbh
Na+/H+ antiporter subunit A {ECO:0000313|EMBL:AJD40520.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
mnhA; multisubunit Na+/H+ antiporter subunit A rbh
SCNpilot_expt_1000_bf_scaffold_3760_4
Rhizobium sp. UR51a, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3220..3627
DNA (408bp) protein (136aa)
msrB; methionine sulfoxide reductase B (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=1604021 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. UR51a.;"
Peptide methionine sulfoxide reductase MsrB n=2 Tax=Rhizobium RepID=U4Q273_9RHIZ
SCNpilot_expt_1000_bf_scaffold_3760_5
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3761..4291
DNA (531bp) protein (177aa)
Uncharacterized protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JBI6_AGRRK
Uncharacterized protein {ECO:0000313|EMBL:KEA07603.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3760_6
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4292..4945)
DNA (654bp) protein (218aa)
Hemolysin 3-related protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5RUZ5_RHIET rbh
hemolysin 3-related protein rbh
Hemolysin 3-related protein {ECO:0000313|EMBL:AIC26455.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
SCNpilot_expt_1000_bf_scaffold_3760_7
Kingella denitrificans, Kingella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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5099..6469
DNA (1371bp) protein (457aa)
Sel1 repeat protein n=1 Tax=Kingella denitrificans ATCC 33394 RepID=F0F1U1_9NEIS
Sel1 repeat protein {ECO:0000313|EMBL:EGC16482.1}; TaxID=888741 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Kingella.;" source="Kingella denitrificans ATCC 33394.;"
hypothetical protein; K07126
SCNpilot_expt_1000_bf_scaffold_3760_8
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6487..6807)
DNA (321bp) protein (107aa)
DnaK suppressor protein n=2 Tax=Rhizobium RepID=U4Q5I4_9RHIZ
DnaK suppressor protein
DnaK suppressor protein {ECO:0000313|EMBL:CDN91494.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
SCNpilot_expt_1000_bf_scaffold_3760_9
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6818..7228)
DNA (411bp) protein (137aa)
UspA domain-containing protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F9B4_9RHIZ
UspA domain-containing protein {ECO:0000313|EMBL:EHS50634.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
uspA; universal stress protein
SCNpilot_expt_1000_bf_scaffold_3760_10
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7625..8383
DNA (759bp) protein (253aa)
glyoxalase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000364767E
Glyoxylase {ECO:0000313|EMBL:EPE98971.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
ring-cleaving dioxygenase; K07104
SCNpilot_expt_1000_bf_scaffold_3760_11
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8477..9613
DNA (1137bp) protein (379aa)
Putative permease n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0CGG9_RHILT
Putative permease {ECO:0000313|EMBL:EJC78475.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3760_12
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10133..10405
DNA (273bp) protein (91aa)
Glycine/D-amino acid oxidase, deaminating n=1 Tax=Rhizobium sp. CF080 RepID=J2J0F4_9RHIZ
FAD dependent oxidoreductase {ECO:0000313|EMBL:EUB95329.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
FAD dependent oxidoreductase
Displaying 12 items

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