name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_3883_1
unknown
|
Not on your lists |
comp(2..106)
|
This feature has no annotations |
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SCNpilot_expt_1000_bf_scaffold_3883_2
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(310..2028)
|
ABC transporter substrate-binding protein n=1 Tax=Rhizobium giardinii RepID=UPI000371A2E4
rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEQ04130.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
sugar ABC transporter substrate-binding protein
rbh
|
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SCNpilot_expt_1000_bf_scaffold_3883_3
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(2112..2393)
|
Putative small integral membrane protein n=1 Tax=Rhizobium sp. CF080 RepID=J3CIL2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EUC00368.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
putative transmembrane protein
|
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SCNpilot_expt_1000_bf_scaffold_3883_4
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2409..3227)
|
ABC-type sugar transport system, permease component n=1 Tax=Rhizobium sp. CF142 RepID=J2LEX8_9RHIZ
ABC sugar (Glycerol) transporter, inner membrane subunit {ECO:0000313|EMBL:CDN46323.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
putative permease component of ABC transporter; K02026 multiple sugar transport system permease protein
|
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SCNpilot_expt_1000_bf_scaffold_3883_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3244..3840)
|
Putative permease component of ABC transporter n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D6B3_9RHIZ
Putative permease component of ABC transporter {ECO:0000313|EMBL:EYR79626.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
sugar transport system, permease; K02025 multiple sugar transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_3883_6
unknown
|
Not on your lists |
3861..4016
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3883_7
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4119..5189)
|
ATPase component of ABC-type sugar transporter n=1 Tax=Rhizobium sp. CF142 RepID=J2LDL5_9RHIZ
ATPase component of ABC-type sugar transporter {ECO:0000313|EMBL:EJJ31627.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
putative ATP-binding component of ABC transporter; K02023 multiple sugar transport system ATP-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_3883_8
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5200..6285)
|
ABC transporter ATP-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00038165C8
rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHF88715.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
putative ATP-binding component of ABC transporter; K02023 multiple sugar transport system ATP-binding protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3883_9
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6349..7005)
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Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
Glycerol-3-phosphate dehydrogenase n=1 Tax=Rhizobium sp. AP16 RepID=J2WX30_9RHIZ
aerobic glycerol-3-phosphate dehydrogenase
|
|
SCNpilot_expt_1000_bf_scaffold_3883_10
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7058..7897)
|
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
glpD; glycerol-3-phosphate dehydrogenase (EC:1.1.5.3); K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
Glycerol-3-phosphate dehydrogenase n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5JBR8_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_3883_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7965..8744)
|
Glycerol-3-phosphate regulon repressor n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMU6_RHITR
glycerol-3-phosphate regulon repressor
Glycerol-3-phosphate regulon repressor {ECO:0000313|EMBL:AGB72698.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
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SCNpilot_expt_1000_bf_scaffold_3883_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8837..9643
|
Short-chain dehydrogenase/reductase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN78_RHITR
short-chain dehydrogenase/reductase
Short-chain dehydrogenase/reductase {ECO:0000313|EMBL:AGB72697.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3883_13
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9700..10593
|
Hydrogen peroxide-inducible activator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZ91_9RHIZ
Hydrogen peroxide-inducible activator {ECO:0000313|EMBL:EYR79619.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
transcriptional regulator protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3883_14
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10781..11242
|
Formate dehydrogenase protein, gamma subunit {ECO:0000313|EMBL:EYR79618.1}; EC=1.2.1.2 {ECO:0000313|EMBL:EYR79618.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
fdsG; NAD-dependent formate dehydrogenase gamma subunit FdsG (EC:1.2.1.2)
Formate dehydrogenase protein, gamma subunit n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQ64_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_3883_15
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11239..12687
|
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit n=1 Tax=Rhizobium sp. CF080 RepID=J2R933_9RHIZ
Formate dehydrogenase {ECO:0000313|EMBL:KGD87566.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
NADH dehydrogenase (quinone); K00124 formate dehydrogenase, beta subunit
|
|
SCNpilot_expt_1000_bf_scaffold_3883_16
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12861..15740
|
Formate dehydrogenase, alpha subunit n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXR6_9RHIZ
rbh
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:EYR79615.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
formate dehydrogenase, alpha subunit
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3883_17
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15764..16582
|
Protein FdhD homolog n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0W716_RHILT
formate dehydrogenase family accessory protein FdhD
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3883_18
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16572..16826
|
NAD-dependent formate dehydrogenase delta subunit; K00126 formate dehydrogenase, delta subunit [EC:1.2.1.2]
NAD-dependent formate dehydrogenase delta subunit n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YGJ3_MESOW
NAD-dependent formate dehydrogenase subunit delta {ECO:0000313|EMBL:ESY83487.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
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SCNpilot_expt_1000_bf_scaffold_3883_19
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16923..18137)
|
5-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; EC=2.3.1.37 {ECO:0000256|RuleBase:RU910713};; 5-aminolevulinic acid synthase {ECO:0000256|RuleBase:RU910713}; Delta-ALA synthase {ECO:0000256|RuleBase:RU910713}; Delta-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
5-aminolevulinate synthase n=1 Tax=Rhizobium sp. RepID=L0NLL2_RHISP
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3883_20
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18339..18728)
|
Carbon monoxide dehydrogenase medium subunit CoxM/CutM 1 {ECO:0000313|EMBL:AJD43066.1}; EC=1.2.99.2 {ECO:0000313|EMBL:AJD43066.1};; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
carbon-monoxide dehydrogenase n=1 Tax=Rhizobium mongolense RepID=UPI0003B312AB
carbon monoxide dehydrogenase medium chain
|
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SCNpilot_expt_1000_bf_scaffold_3883_21
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19271..21523)
|
Carbon monoxide dehydrogenase protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V6X3_9RHIZ
rbh
Carbon monoxide dehydrogenase protein {ECO:0000313|EMBL:ENN89550.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
carbon monoxide dehydrogenase large chain
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3883_22
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21558..22085)
|
Carbon monoxide dehydrogenase small chain n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN67_RHITR
carbon monoxide dehydrogenase small chain
Carbon monoxide dehydrogenase small chain {ECO:0000313|EMBL:AGB72682.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
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SCNpilot_expt_1000_bf_scaffold_3883_23
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22460..22726
|
Uncharacterized protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JBW6_AGRRK
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KEA03845.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
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SCNpilot_expt_1000_bf_scaffold_3883_24
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22976..24901
|
Outer membrane protein n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HDM0_RHIRD
Membrane protein {ECO:0000313|EMBL:KJF71856.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
hypothetical protein; K07278 outer membrane protein
|
|
SCNpilot_expt_1000_bf_scaffold_3883_25
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24949..30687
|
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00036880BE
rbh
hypothetical protein; K09800 hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:ABR61718.1}; Flags: Precursor;; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
|
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SCNpilot_expt_1000_bf_scaffold_3883_26
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30793..31395)
|
Periplasmic protein thiol:disulphide oxidoreductase n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MAH4_RHISN
periplasmic protein thiol/disulfide oxidoreductase; K02199 cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
Periplasmic protein thiol:disulphide oxidoreductase {ECO:0000313|EMBL:ACP26967.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
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SCNpilot_expt_1000_bf_scaffold_3883_27
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31392..31565)
|
Heme exporter protein CcmD n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F2J2_9RHIZ
Heme exporter protein CcmD {ECO:0000313|EMBL:EHS53093.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
heme exporter protein CcmD
|
|
SCNpilot_expt_1000_bf_scaffold_3883_28
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31562..32329)
|
ABC transporter membrane spanning protein (Heme) n=1 Tax=Rhizobium lupini HPC(L) RepID=K5D3A4_RHILU
rbh
Heme transporter HemC {ECO:0000313|EMBL:KGE83508.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
ccmC; heme ABC transporter (heme exporter protein C), permease protein (cytochrome c biogenesis)
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3883_29
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32375..33034)
|
Heme exporter protein B n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F2J4_9RHIZ
rbh
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
ccmB; heme exporter protein CcmB; K02194 heme exporter protein B
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3883_30
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(33210..33851)
|
ccmA; cytochrome c biogenesis protein CcmA (EC:3.6.3.41); K02193 heme exporter protein A [EC:3.6.3.41]
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;"
Heme ABC transporter, ATP-binding protein (Involved in cytochrome c biogenesis) n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3PR03_RHIE6
|