name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_5234_1
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..1105)
|
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
Histidinol dehydrogenase n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1XJF8_9RHIZ
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_5234_2
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1151..2887)
|
UPI0003D03187 related cluster n=1 Tax=unknown RepID=UPI0003D03187
rbh
ABC transporter permease {ECO:0000313|EMBL:ESZ19207.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
binding-protein-dependent transport systems inner membrane component; K02053 putative spermidine/putrescine transport system permease protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_5234_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3134..4249)
|
Extracellular solute-binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D4L1_9RHIZ
rbh
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:EYR82530.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
extracellular solute-binding protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_5234_4
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4357..4941)
|
ABC transporter ATP-binding protein n=1 Tax=Ochrobactrum anthropi RepID=UPI0002896BA3
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EXL06108.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
ABC transporter; K02052 putative spermidine/putrescine transport system ATP-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_5234_5
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4996..5487)
|
polyamine-transporting ATPase (EC:3.6.3.31)
UPI0003D0513A related cluster n=1 Tax=unknown RepID=UPI0003D0513A
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESZ19204.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
|
|
SCNpilot_expt_1000_bf_scaffold_5234_6
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5605..5787)
|
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase 1 {ECO:0000313|EMBL:AJD44521.1}; EC=1.1.1.127 {ECO:0000313|EMBL:AJD44521.1};; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Rhizobium mongolense RepID=UPI0003B39F7E
short-chain dehydrogenase/reductase SDR
|
|
SCNpilot_expt_1000_bf_scaffold_5234_7
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6628..6939
|
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479};; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
histidine ammonia-lyase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F13B57
histidine ammonia-lyase
|
|
SCNpilot_expt_1000_bf_scaffold_5234_8
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6903..8168
|
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479};; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
histidine ammonia-lyase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F13B57
|
|
SCNpilot_expt_1000_bf_scaffold_5234_9
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8234..9985)
|
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J1T019_9RHIZ
rbh
Uncharacterized protein {ECO:0000313|EMBL:EJJ24936.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
chemotaxis sensory transducer protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_5234_10
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10337..10663
|
hypothetical protein n=1 Tax=Rhizobium RepID=UPI0003659D36
Uncharacterized protein {ECO:0000313|EMBL:CDN56454.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_5234_11
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10664..11032
|
Response regulator protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5SMP0_RHIET
response regulator protein
Response regulator protein {ECO:0000313|EMBL:AGS23322.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
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SCNpilot_expt_1000_bf_scaffold_5234_12
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11029..13068
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
cheA; Chemotaxis protein histidine kinase; K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
rbh
Chemotaxis protein histidine kinase-like protein n=1 Tax=Rhizobium sp. CF142 RepID=J2KVX6_9RHIZ
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_5234_13
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13065..13556
|
Chemotaxis signal transduction protein n=1 Tax=Rhizobium sp. CF080 RepID=J2QDQ6_9RHIZ
Chemotaxis protein CheW {ECO:0000313|EMBL:KGD98276.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
cheW4; chemotaxis signal transduction protein; K03408 purine-binding chemotaxis protein CheW
|
|
SCNpilot_expt_1000_bf_scaffold_5234_14
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13585..14136
|
methyl-accepting chemotaxis protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037C52D8
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ACS57807.1}; Flags: Precursor;; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
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SCNpilot_expt_1000_bf_scaffold_5234_15
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14124..14531
|
Methyl-accepting chemotaxis protein n=1 Tax=Rhizobium sp. CF080 RepID=J2HQZ6_9RHIZ
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EUC00835.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein
|