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SCNpilot_expt_1000_bf_scaffold_5369

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5369_1
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(54..758)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2N490_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EKF42178.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
CbbQ-like protein; K04748 nitric oxide reductase NorQ protein
SCNpilot_expt_1000_bf_scaffold_5369_2
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(979..1998)
DNA (1020bp) protein (340aa)
Homoserine O-acetyltransferase {ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00276255};; EC=2.3.1.31 {ECO:0000256|SAAS:SAAS00070942};; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein; K00641 homoserine O-acetyltransferase [EC:2.3.1.31] rbh
Homoserine O-acetyltransferase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H557_9BRAD rbh
SCNpilot_expt_1000_bf_scaffold_5369_3
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2057..3388)
DNA (1332bp) protein (444aa)
allantoin permease n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000346542C rbh
Uncharacterized protein {ECO:0000313|EMBL:GAN76998.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein; K10974 cytosine permease rbh
SCNpilot_expt_1000_bf_scaffold_5369_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3457..4491)
DNA (1035bp) protein (345aa)
Aliphatic amidase {ECO:0000256|HAMAP-Rule:MF_01242}; EC=3.5.1.4 {ECO:0000256|HAMAP-Rule:MF_01242};; Acylamide amidohydrolase {ECO:0000256|HAMAP-Rule:MF_01242}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
amiE; acylamide amidohydrolase (EC:3.5.1.4); K01426 amidase [EC:3.5.1.4]
Aliphatic amidase n=1 Tax=Nitratireductor indicus C115 RepID=K2NWJ8_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_5369_5
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4503..5198)
DNA (696bp) protein (232aa)
Urea ABC transporter ATP-binding protein n=2 Tax=Labrenzia RepID=U7FXW6_9RHOB rbh
High-affinity branched-chain amino acid transport ATP-binding protein BraG {ECO:0000313|EMBL:CDX35748.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
braG; putative branched-chain amino acid ABC transporter ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_5369_6
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5191..5955)
DNA (765bp) protein (255aa)
Branched chain amino acid ABC transporter ATP-binding protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P497_9RHIZ rbh
Branched chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:EKF42181.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
putative branched-chain amino acid ABC transporter, ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_5369_7
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5952..6782)
DNA (831bp) protein (277aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Nitratireductor indicus C115 RepID=K2PM83_9RHIZ rbh
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:EKF42182.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
putative branched-chain amino acid transport permease component
SCNpilot_expt_1000_bf_scaffold_5369_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7105..7974)
DNA (870bp) protein (290aa)
ABC transporter permease n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZP5_9RHIZ rbh
ABC transporter permease {ECO:0000313|EMBL:EYR78212.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative high-affinity branched-chain amino acid transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_5369_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8039..8797)
DNA (759bp) protein (253aa)
Aliphatic amidase expression-regulating protein AmiC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CV50_9RHIZ rbh
ABC-type branched-chain amino acid transport system periplasmic component {ECO:0000313|EMBL:EYR78211.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative aliphatic amidase expression-regulating protein
Displaying 9 items

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