name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_4379_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..1679)
|
GTP-binding protein TypA/BipA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZF3_9RHIZ
rbh
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:EYR79680.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
typA; GTP-binding protein TypA/BipA
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4379_2
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1802..3379)
|
Alkaline phosphatase D-related protein {ECO:0000313|EMBL:AJD43134.1}; EC=3.1.3.1 {ECO:0000313|EMBL:AJD43134.1};; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
alkaline phosphatase n=1 Tax=Rhizobium mongolense RepID=UPI0003B5C00B
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4379_3
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3528..5630)
|
Peptidyl-dipeptidase Dcp n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HRD7_9RHIZ
rbh
Peptidyl-dipeptidase Dcp {ECO:0000313|EMBL:EPE95836.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
peptidyl-dipeptidase dcp (Dipeptidyl carboxypeptidase)
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4379_4
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5842..6273
|
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00035FF7A9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAK09993.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
|
|
SCNpilot_expt_1000_bf_scaffold_4379_5
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6344..6679)
|
Putative threonine efflux protein n=1 Tax=Rhizobium sp. CF142 RepID=J1SYV6_9RHIZ
Putative threonine efflux protein {ECO:0000313|EMBL:EJJ30448.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
lysine exporter protein LysE/YggA
|
|
SCNpilot_expt_1000_bf_scaffold_4379_6
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7344..7592
|
Transcriptional regulator, MarR family n=2 Tax=Agrobacterium RepID=F0L3I4_AGRSH
MarR family transcriptional regulator {ECO:0000313|EMBL:CDN93110.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
transcriptional regulator, MarR family
|
|
SCNpilot_expt_1000_bf_scaffold_4379_7
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7751..8974)
|
argG; argininosuccinate synthase (EC:6.3.4.5)
rbh
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
Argininosuccinate synthase n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MAJ3_RHISN
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4379_8
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9579..10154
|
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FAK2_9RHIZ
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EHS50165.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
oxidoreductase
|
|
SCNpilot_expt_1000_bf_scaffold_4379_9
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10335..11129)
|
ABC transporter ATP-binding protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HB79_9RHIZ
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EPE95844.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
ABC transporter; K05833 putative ABC transport system ATP-binding protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4379_10
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11126..12004)
|
ABC-type transporter, integral membrane subunit n=6 Tax=Rhizobium meliloti RepID=F6BU19_SINMB
rbh
Putative transport system permease ABC transporter
rbh
Putative transport system permease ABC transporter {ECO:0000313|EMBL:CAC47791.2}; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;"
|
|
SCNpilot_expt_1000_bf_scaffold_4379_11
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12127..13080)
|
ABC-type uncharacterized transport system, periplasmic component n=1 Tax=Rhizobium sp. CF142 RepID=J2LBJ9_9RHIZ
rbh
ABC transporter permease {ECO:0000313|EMBL:KDP71499.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
ABC transporter substrate-binding protein; K01989 putative ABC transport system substrate-binding protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4379_12
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13172..14302)
|
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=3
23S rRNA m2A2503 methyltransferase (EC:2.1.1.-)
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Rhizobium sp. RepID=L0NK34_RHISP
|
|
SCNpilot_expt_1000_bf_scaffold_4379_13
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14646..15149)
|
Uncharacterized protein n=2 Tax=Rhizobium radiobacter RepID=G6XTK9_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:GAK71442.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
conserved exported protein of unknown function
|
|
SCNpilot_expt_1000_bf_scaffold_4379_14
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15452..15832)
|
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000369DE56
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF86016.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
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|
SCNpilot_expt_1000_bf_scaffold_4379_15
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16212..16523)
|
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-]
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
2'-5' RNA ligase n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JCJ4_AGRRK
|
|
SCNpilot_expt_1000_bf_scaffold_4379_16
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16864..17517)
|
Lysophospholipase L1-like esterase n=1 Tax=Rhizobium sp. CF142 RepID=J2LAB9_9RHIZ
rbh
Lysophospholipase L1-like esterase {ECO:0000313|EMBL:EJJ30462.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
|
|
SCNpilot_expt_1000_bf_scaffold_4379_17
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17605..18315
|
ABC transporter n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PK79_9RHIZ
rbh
ABC transporter {ECO:0000313|EMBL:EKF61328.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
ABC transporter permease; K02003 putative ABC transport system ATP-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_4379_18
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18312..20861
|
glycosyl transferase family 1 n=1 Tax=Rhizobium gallicum RepID=UPI0003745187
rbh
ABC transporter permease {ECO:0000313|EMBL:KEC71709.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. phaseoli CCGM1.;"
ABC transporter, permease (involved in lysophospholipase L1 biosynthesis); K02004 putative ABC transport system permease protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4379_19
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21054..21791
|
Uncharacterized protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MAI2_RHISN
hypothetical protein; K06890
Uncharacterized protein {ECO:0000313|EMBL:ACP26975.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
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SCNpilot_expt_1000_bf_scaffold_4379_20
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21928..22329)
|
Uncharacterized protein n=1 Tax=Rhizobium sp. AP16 RepID=J2D4A4_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJK84504.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
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SCNpilot_expt_1000_bf_scaffold_4379_21
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22596..23102)
|
Uncharacterized protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VQ51_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJZ21027.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
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