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SCNpilot_expt_1000_bf_scaffold_4457

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4457_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(75..761)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CSQ3_9RHIZ rbh
Ferredoxin {ECO:0000313|EMBL:EYR77802.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_4457_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(863..2443)
DNA (1581bp) protein (527aa)
Trimethylamine methyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN69_RHITR rbh
trimethylamine methyltransferase rbh
Trimethylamine methyltransferase {ECO:0000313|EMBL:AGB71520.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_4457_3
unknown

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2674..2775
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4457_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2838..3542
DNA (705bp) protein (235aa)
Dimethylamine corrinoid protein MtbC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EUF4_9RHIZ
Dimethylamine corrinoid protein MtbC {ECO:0000313|EMBL:EYR77804.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
corrinoid methyltransferase protein
SCNpilot_expt_1000_bf_scaffold_4457_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3592..3750)
DNA (159bp) protein (53aa)
Uncharacterized protein n=4 Tax=Agrobacterium RepID=A8WFE1_AGRT5
ecnB; entericidin B
Uncharacterized protein {ECO:0000313|EMBL:AHK01616.1}; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens LBA4213 (Ach5).;"
SCNpilot_expt_1000_bf_scaffold_4457_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3768..4415
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJE0_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB71523.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_4457_7
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4493..5287
DNA (795bp) protein (265aa)
Methionyl-tRNA formyltransferase n=1 Tax=Rhizobium sp. CF080 RepID=J3AW50_9RHIZ
Formyl transferase domain protein {ECO:0000313|EMBL:EUB96269.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
formyltransferase
SCNpilot_expt_1000_bf_scaffold_4457_8
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5386..5691
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00037116D0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACP25608.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
SCNpilot_expt_1000_bf_scaffold_4457_9
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5684..6262
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F1B5_9RHIZ rbh
Methylenetetrahydrofolate reductase {ECO:0000313|EMBL:KDP76310.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4457_10
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6704..7327
DNA (624bp) protein (208aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=698936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain BL225C).;"
methylenetetrahydrofolate reductase n=1 Tax=Rhizobium meliloti RepID=UPI0003819D59
oxidoreductase
SCNpilot_expt_1000_bf_scaffold_4457_11
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7612..8133
DNA (522bp) protein (174aa)
methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Methionine synthase MetH {ECO:0000313|EMBL:AFL52800.1}; EC=2.1.1.13 {ECO:0000313|EMBL:AFL52800.1};; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
methyltetrahydrofolate:corrinoid methyltransferase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F6861F
Displaying 11 items

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