ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4515

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4515_1
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1944
DNA (1944bp) protein (648aa)
Regulatory protein NosR n=1 Tax=Achromobacter cycloclastes RepID=O68476_ACHCY
FMN-binding protein {ECO:0000313|EMBL:KDP72992.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
FMN-binding domain-containing protein
SCNpilot_expt_1000_bf_scaffold_4515_2
Achromobacter cycloclastes, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1963..3891
DNA (1929bp) protein (643aa)
Nitrous-oxide reductase; EC=1.7.2.4;; N(2)OR; N2O reductase; Flags: Precursor;; TaxID=223 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter cycloclastes.;"
nitrous-oxide reductase (EC:1.7.99.6); K00376 nitrous-oxide reductase [EC:1.7.2.4] rbh
Nitrous-oxide reductase n=3 Tax=Proteobacteria RepID=NOSZ_ACHCY rbh
SCNpilot_expt_1000_bf_scaffold_4515_3
Achromobacter cycloclastes, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3895..5223
DNA (1329bp) protein (443aa)
Accessory protein NosD n=1 Tax=Achromobacter cycloclastes RepID=O68478_ACHCY rbh
Accessory protein NosD {ECO:0000313|EMBL:AAD09158.1}; NosD protein {ECO:0000313|EMBL:CAA75426.1}; Flags: Precursor;; TaxID=223 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter cycloclastes.;"
periplasmic copper-binding; K07218 nitrous oxidase accessory protein rbh
SCNpilot_expt_1000_bf_scaffold_4515_4
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5189..6088
DNA (900bp) protein (300aa)
NosF protein n=1 Tax=Achromobacter cycloclastes RepID=O68479_ACHCY rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDP72989.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_4515_5
Achromobacter cycloclastes, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6880..7461
DNA (582bp) protein (194aa)
NosL n=1 Tax=Achromobacter cycloclastes RepID=O68481_ACHCY
NosL {ECO:0000313|EMBL:AAD09161.1}; NosL protein {ECO:0000313|EMBL:CAA75429.1}; Flags: Precursor;; TaxID=223 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter cycloclastes.;"
NosL family protein
SCNpilot_expt_1000_bf_scaffold_4515_6
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7465..8394
DNA (930bp) protein (310aa)
NosX n=1 Tax=Achromobacter cycloclastes RepID=O68482_ACHCY
Thiamine biosynthesis protein ApbE {ECO:0000313|EMBL:KDP72986.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
ApbE family lipoprotein; K03734 thiamine biosynthesis lipoprotein
SCNpilot_expt_1000_bf_scaffold_4515_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8429..8578
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CCC7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR82172.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_expt_1000_bf_scaffold_4515_8
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9161..11590)
DNA (2430bp) protein (810aa)
hypothetical protein n=1 Tax=Burkholderia thailandensis RepID=UPI00016A6128
Uncharacterized protein {ECO:0000313|EMBL:EWC59048.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
SCNpilot_expt_1000_bf_scaffold_4515_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12631..13542
DNA (912bp) protein (304aa)
Ferredoxin-dependent glutamate synthase 1 {ECO:0000313|EMBL:EYR81275.1}; EC=1.4.7.1 {ECO:0000313|EMBL:EYR81275.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
gltB; glutamate synthase large subunit; K00265 glutamate synthase (NADPH/NADH) large chain [EC:1.4.1.13 1.4.1.14]
GltA n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI00036EBBBC
SCNpilot_expt_1000_bf_scaffold_4515_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13533..13778
DNA (246bp) protein (82aa)
Ferredoxin-dependent glutamate synthase 1 {ECO:0000313|EMBL:EYR81275.1}; EC=1.4.7.1 {ECO:0000313|EMBL:EYR81275.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Glutamate synthase large subunit n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5J519_9RHIZ
Glutamate synthase family protein
Displaying 10 items

View Taxonomy