name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_4786_1
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..677)
|
enterobactin ABC transporter permease n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003A2F83F
ABC transporter permease {ECO:0000313|EMBL:EKF42549.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
iron-siderophore ABC transporter; permease component; K02015 iron complex transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_4786_2
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(667..1683)
|
iron ABC transporter permease n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003A3CF6A
rbh
Petrobactin ABC transporter permease I {ECO:0000313|EMBL:EKF42548.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
transport system permease; K02015 iron complex transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_4786_3
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1683..2606)
|
Iron-siderophore ABC transporter n=1 Tax=Nitratireductor indicus C115 RepID=K2PN96_9RHIZ
rbh
Iron ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEQ04525.1}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;"
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4786_4
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2786..4807)
|
Exogenous ferric siderophore receptor n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UD97_RHIRD
rbh
Exogenous ferric siderophore receptor {ECO:0000313|EMBL:EGP55425.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
Outer membrane receptor for ferrienterochelin and colicins
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4786_5
unknown
|
Not on your lists |
comp(5040..6185)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_4786_6
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6833..8005
|
TonB-dependent receptor n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WVV9_COMTE
TonB-dependent receptor {ECO:0000313|EMBL:EED67731.1}; Flags: Precursor;; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
TonB-dependent receptor
|
|
SCNpilot_expt_1000_bf_scaffold_4786_7
bacterium YEK0313, Bacteria
|
Not on your lists |
7983..8927
|
TonB-dependent receptor n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M5Z8_9RHIZ
Pesticin receptor {ECO:0000313|EMBL:CEJ14753.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
TonB-dependent receptor
|
|
SCNpilot_expt_1000_bf_scaffold_4786_8
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8927..10126
|
Major facilitator superfamily transporter n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N346_9RHIZ
rbh
Major facilitator superfamily transporter {ECO:0000313|EMBL:EKF18618.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
major facilitator superfamily transporter
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4786_9
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10123..10791
|
type 12 methyltransferase; K15256 tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
Type 12 methyltransferase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LLI7_9RHIZ
Type 12 methyltransferase {ECO:0000313|EMBL:EKF18619.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
|
|
SCNpilot_expt_1000_bf_scaffold_4786_10
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10871..11395
|
TetR family transcriptional regulator n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M948_9RHIZ
TetR family transcriptional regulator {ECO:0000313|EMBL:EKF18621.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
TetR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_4786_11
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11520..12047
|
Uncharacterized protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9J7Q4_AGRRK
VirR {ECO:0000313|EMBL:KGD86516.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_4786_12
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12055..12288)
|
hypothetical protein n=1 Tax=Rhizobium gallicum RepID=UPI000376C663
Molybdopterin binding protein {ECO:0000313|EMBL:EPE99976.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
molybdo-pterin binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_4786_13
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12490..13200
|
hypothetical protein n=1 Tax=Rhizobium sp. JGI 0001005-H05 RepID=UPI000371147B
Protein tyrosine/serine phosphatase {ECO:0000313|EMBL:EJJ24629.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
tyrosine/serine protein phosphatase
|
|
SCNpilot_expt_1000_bf_scaffold_4786_14
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13232..13819)
|
Uncharacterized protein n=2 Tax=Rhodospirillum rubrum RepID=Q2RRA0_RHORT
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:ABC23345.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
|
|
SCNpilot_expt_1000_bf_scaffold_4786_15
unknown
|
Not on your lists |
14108..14347
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_4786_16
unknown
|
Not on your lists |
14486..14650
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_4786_17
unknown
|
Not on your lists |
14669..14830
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_4786_18
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15091..15990
|
LysR family transcriptional regulator n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00036B7DBE
Strain MEJ076 contig_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ03857.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
transcriptional regulator, LysR family
|
|
SCNpilot_expt_1000_bf_scaffold_4786_19
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16483..17286)
|
putative malate dehydrogenase protein (EC:1.1.1.37)
Putative malate dehydrogenase protein n=1 Tax=Rhizobium etli (strain CFN 42 / ATCC 51251) RepID=Q2JYL8_RHIEC
Malate dehydrogenase {ECO:0000313|EMBL:KDP72593.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
|
|
SCNpilot_expt_1000_bf_scaffold_4786_20
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17288..17917)
|
stcD1; N-methylproline demethylase StcD (EC:1.-.-.-)
oxidoreductase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003720957
Oxidoreductase {ECO:0000313|EMBL:KDP72594.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
|
|
SCNpilot_expt_1000_bf_scaffold_4786_21
unknown
|
Not on your lists |
18489..19346
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_4786_22
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20044..20316)
|
putative glycine betaine/L-proline ABC transporter ATP-binding protein (EC:3.6.3.32); K02000 glycine betaine/proline transport system ATP-binding protein [EC:3.6.3.32]
Probable glycine betaine/L-proline ABC transporter, ATP-binding protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3Q3B5_RHIE6
Glycine/betaine ABC transporter ATPase {ECO:0000313|EMBL:KDP72595.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
|
|
SCNpilot_expt_1000_bf_scaffold_4786_23
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20309..21196)
|
ABC-type proline/glycine betaine transport system, permease component n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0CY81_RHILT
rbh
ABC transporter permease {ECO:0000313|EMBL:KDP72596.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
glycine betaine/L-proline ABC transporter permease protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4786_24
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21423..21602)
|
Amino acid ABC transporter substrate-binding protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VVA5_9RHIZ
amino acid ABC transporter substrate-binding protein; K02002 glycine betaine/proline transport system substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDP72597.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
|
|
SCNpilot_expt_1000_bf_scaffold_4786_25
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21551..22429)
|
ABC-type proline/glycine betaine transport system, periplasmic component n=1 Tax=Rhizobium sp. CF122 RepID=J3BFJ2_9RHIZ
ABC-type proline/glycine betaine transport system, periplasmic component {ECO:0000313|EMBL:EJL50461.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
putative substrate-binding component of ABC transporter; K02002 glycine betaine/proline transport system substrate-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_4786_26
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22497..23324)
|
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
pyrroline-5-carboxylate reductase n=1 Tax=Rhizobium gallicum RepID=UPI00035FEBB8
rbh
putative pyrroline-5-carboxylate reductase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4786_27
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23305..23934)
|
Putative TetR family transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CLF0_9RHIZ
rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:KDP72599.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
putative TetR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_4786_28
unknown
|
Not on your lists |
24752..25453
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_4786_29
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26329..26544
|
Glutathione-dependent formaldehyde-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00723}; EC=4.4.1.22 {ECO:0000256|HAMAP-Rule:MF_00723};; S-(hydroxymethyl)glutathione synthase {ECO:0000256|HAMAP-Rule:MF_00723}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
glutathione-dependent formaldehyde-activating enzyme; K03396 S-(hydroxymethyl)glutathione synthase [EC:4.4.1.22]
Glutathione-dependent formaldehyde-activating enzyme n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUE5_9RHIZ
|