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SCNpilot_expt_1000_bf_scaffold_7011

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7011_1
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1511)
DNA (1509bp) protein (503aa)
Transcription termination factor NusA n=1 Tax=Rhizobium sp. CF142 RepID=J2B424_9RHIZ
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
nusA; transcription elongation factor NusA; K02600 N utilization substance protein A
SCNpilot_expt_1000_bf_scaffold_7011_2
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1559..2164)
DNA (606bp) protein (202aa)
Ribosome maturation factor RimP n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q614_9RHIZ
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
hypothetical protein; K09748 ribosome maturation factor RimP rbh
SCNpilot_expt_1000_bf_scaffold_7011_3
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2398..3636)
DNA (1239bp) protein (413aa)
Membrane-bound lytic murein transglycosylase B n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CIT6_9RHIZ
Lytic murein transglycosylase {ECO:0000313|EMBL:EUC00750.1}; Flags: Precursor;; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
putative lytic murein transglycosylase rbh
SCNpilot_expt_1000_bf_scaffold_7011_4
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3649..4254)
DNA (606bp) protein (202aa)
Recombination protein RecR n=2 Tax=Rhizobium/Agrobacterium group RepID=RECR_AGRRK rbh
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
recR; recombination protein RecR; K06187 recombination protein RecR rbh
SCNpilot_expt_1000_bf_scaffold_7011_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4313..4924
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0V6P7_RHILV rbh
Uncharacterized protein {ECO:0000313|EMBL:EJC68846.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_7011_6
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4925..5536)
DNA (612bp) protein (204aa)
lysine transporter LysE n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003738D8C rbh
Lysine transporter LysE {ECO:0000313|EMBL:KGD98192.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
amino acid efflux transmembrane protein rbh
SCNpilot_expt_1000_bf_scaffold_7011_7
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5594..5917)
DNA (324bp) protein (108aa)
Nucleoid-associated protein Agau_C101133 n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U3M2_RHIRD
Nucleoid-associated protein RP75_02005 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
hypothetical protein; K09747 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_7011_8
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5939..6913)
DNA (975bp) protein (325aa)
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:KEA07950.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KEA07950.1};; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
dnaX; DNA polymerase III subunits gamma and tau; K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
DNA polymerase III, subunit gamma/tau n=1 Tax=Rhizobium sp. AP16 RepID=J2WWW4_9RHIZ
SCNpilot_expt_1000_bf_scaffold_7011_9
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6910..7479)
DNA (570bp) protein (190aa)
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:KDP70767.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KDP70767.1};; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
dnaX; DNA polymerase III subunits gamma and tau; K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
DNA polymerase III subunit tau n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3XFA1_RHIFR
Displaying 9 items

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