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SCNpilot_expt_1000_bf_scaffold_6366

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6366_1
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..508)
DNA (507bp) protein (169aa)
Oxidoreductase domain protein n=1 Tax=Rhizobium sp. RepID=L0NN25_RHISP
Oxidoreductase {ECO:0000313|EMBL:KEQ07268.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
oxidoreductase
SCNpilot_expt_1000_bf_scaffold_6366_2
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(505..1344)
DNA (840bp) protein (280aa)
sugar ABC transporter permease n=1 Tax=Rhizobium giardinii RepID=UPI000369A566 rbh
Sugar ABC transporter permease protein {ECO:0000313|EMBL:AJD41874.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_6366_3
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1355..2305)
DNA (951bp) protein (317aa)
Binding-protein-dependent transport system inner membrane component n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CMG7_9RHIZ
ABC transporter permease {ECO:0000313|EMBL:KDP70805.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
binding-protein-dependent transport system inner membrane protein; K02025 multiple sugar transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_6366_4
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2704..3960)
DNA (1257bp) protein (419aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Rhizobium giardinii RepID=UPI00037FA2D4 rbh
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDP70804.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
extracellular solute-binding protein, family 1; K02027 multiple sugar transport system substrate-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_6366_5
unknown

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comp(4255..5130)
DNA (876bp) protein (292aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6366_6
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5344..5766
DNA (423bp) protein (141aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J3BYL8_9RHIZ
Transcriptional regulator, GntR family with UTRA sensor domain containing protein {ECO:0000313|EMBL:EUC00790.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
putative GntR family transcriptional regulator; K03710 GntR family transcriptional regulator
Displaying 6 items

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