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SCNpilot_expt_1000_bf_scaffold_6684

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6684_1
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1108)
DNA (1107bp) protein (369aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
two component sensor kinase (EC:2.7.3.-)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036DADC1
SCNpilot_expt_1000_bf_scaffold_6684_2
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1235..2839)
DNA (1605bp) protein (535aa)
Nickel-transporting ATPase (EC:3.6.3.30 3.6.3.24) rbh
peptide ABC transporter ATPase n=1 Tax=Rhizobium meliloti RepID=UPI00037CA60F rbh
ABC oligopeptide transporter, fused ATPase subunits {ECO:0000313|EMBL:AHK45685.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
SCNpilot_expt_1000_bf_scaffold_6684_3
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2842..3216)
DNA (375bp) protein (125aa)
Oligopeptide transport system permease protein OppC n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X1A1_RHIFR
ABC transporter permease; K15582 oligopeptide transport system permease protein
ABC transporter integral membrane protein {ECO:0000313|EMBL:EHK77469.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
SCNpilot_expt_1000_bf_scaffold_6684_4
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3180..3938)
DNA (759bp) protein (253aa)
peptide ABC transporter permease n=1 Tax=Rhizobium giardinii RepID=UPI00037760F7
oppC1; oligopeptide transport system permease OppC
Oligopeptide transport system permease protein OppC {ECO:0000313|EMBL:AFL49657.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_expt_1000_bf_scaffold_6684_5
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3935..4825)
DNA (891bp) protein (297aa)
Oligopeptide transport system permease protein OppB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C7W7_9RHIZ
ABC transporter {ECO:0000313|EMBL:KDP72904.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
permease protein oppB; K15581 oligopeptide transport system permease protein
SCNpilot_expt_1000_bf_scaffold_6684_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4895..6496)
DNA (1602bp) protein (534aa)
ABC transporter substrate-binding protein n=1 Tax=Rhizobium meliloti RepID=UPI000367724C rbh
ABC-type oligopeptide transport system periplasmic component {ECO:0000313|EMBL:EYR78739.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ABC transporter substrate-binding protein; K15580 oligopeptide transport system substrate-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_6684_7
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6633..8408)
DNA (1776bp) protein (592aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000375B08E rbh
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJK78322.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase rbh
SCNpilot_expt_1000_bf_scaffold_6684_8
unknown

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8706..8888
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6684_9
unknown

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9046..9171
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying 9 items

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