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SCNpilot_expt_1000_bf_scaffold_2049

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2049_1
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(592..1713)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Celeribacter baekdonensis B30 RepID=K2J9W1_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EJZ29772.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2049_2
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1827..2546)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Celeribacter baekdonensis B30 RepID=K2IWL0_9RHOB
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCNpilot_expt_1000_bf_scaffold_2049_3
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2786..4909)
DNA (2124bp) protein (708aa)
RNA polymerase sigma factor RpoD n=2 Tax=Bradyrhizobiaceae RepID=F7QFT6_9BRAD
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
rpoD2; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor
SCNpilot_expt_1000_bf_scaffold_2049_4
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5318..7321)
DNA (2004bp) protein (668aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
dnaG; DNA primase DnaG (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-] rbh
DNA primase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P9W3_9BRAD rbh
SCNpilot_expt_1000_bf_scaffold_2049_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7953..8576
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P315_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36972.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
conserved hypothetical protein; putative isochorismatase family protein
SCNpilot_expt_1000_bf_scaffold_2049_6
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8889..11294
DNA (2406bp) protein (802aa)
Sensory box/GGDEF family protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KP11_9BURK rbh
Diguanylate phosphodiesterase {ECO:0000313|EMBL:EYC51611.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
sensory box/GGDEF family protein
SCNpilot_expt_1000_bf_scaffold_2049_7
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11328..11729)
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QFU0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP09882.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2049_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11756..12571)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P319_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36977.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cysteine protease transglutaminase-like protein rbh
SCNpilot_expt_1000_bf_scaffold_2049_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12565..13509)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 PF22_9BRAD">RepID=K8PF22_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36978.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2049_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13576..14388
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P863_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36979.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2049_11
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14522..15046)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P696_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35165.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
Displaying 11 items

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