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SCNpilot_expt_1000_bf_scaffold_2367

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2367_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..367)
DNA (366bp) protein (122aa)
chemotaxis protein CheY n=1 Tax=Afipia birgiae RepID=UPI0002F2A0D3
Uncharacterized protein {ECO:0000313|EMBL:EKS36102.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
response regulator receiver domain-containing protein
SCNpilot_expt_1000_bf_scaffold_2367_2
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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575..1366
DNA (792bp) protein (264aa)
Uncharacterized protein {ECO:0000313|EMBL:KIJ71384.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
SCNpilot_expt_1000_bf_scaffold_2367_3
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1612..1839
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PE43_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39019.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_expt_1000_bf_scaffold_2367_4
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1990..4185)
DNA (2196bp) protein (732aa)
TonB-dependent receptor n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QQ54_9BRAD rbh
TonB-dependent receptor {ECO:0000313|EMBL:EGP06831.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
SCNpilot_expt_1000_bf_scaffold_2367_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4621..5100
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000364B20C
Uncharacterized protein {ECO:0000313|EMBL:EKS36097.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
conserved exported hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2367_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5123..5593
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P3N6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36096.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
tryptophan-rich sensory protein; K07185 tryptophan-rich sensory protein
SCNpilot_expt_1000_bf_scaffold_2367_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5601..6827)
DNA (1227bp) protein (409aa)
beta-lactamase 6-aminohexanoate-dimer hydrolase (EC:3.5.1.46); K01453 [EC:3.5.1.46] rbh
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P8Y8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36095.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_2367_8
unknown

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6886..7116
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2367_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7239..7619)
DNA (381bp) protein (127aa)
photosystem reaction center subunit H n=1 Tax=Afipia birgiae RepID=UPI0002F1F3AF
Uncharacterized protein {ECO:0000313|EMBL:EKS36094.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2367_10
unknown

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comp(7644..7790)
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2367_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7876..8085)
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000311C07C
Uncharacterized protein {ECO:0000313|EMBL:EKS36093.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2367_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8596..9069
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P5S1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36089.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2367_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9106..9681
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PCL6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36088.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2367_14
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9760..10467)
DNA (708bp) protein (236aa)
Putative rRNA methylase n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZA79_9BRAD
putative rRNA methylase
Putative rRNA methylase {ECO:0000313|EMBL:BAM90594.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCNpilot_expt_1000_bf_scaffold_2367_15
unknown

Not on your lists

comp(10464..10637)
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2367_16
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11179..11772
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S177_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD87954.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2367_17
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11825..12145
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P8V0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39007.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
Ion transport 2 domain-containing protein
Displaying 17 items

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