name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1013_1
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
560..1165
|
Response regulator with putative antiterminator output domain n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KGP9_MESAW
rbh
Two-component response regulator {ECO:0000313|EMBL:CDX32390.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
response regulator with putative antiterminator output domain
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1013_2
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1162..2397
|
Nitrate transporter component NrtA n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F0W5_9RHIZ
rbh
Nitrate transporter component NrtA {ECO:0000313|EMBL:CCV09803.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
nitrate transporter component, NrtA; K02049 NitT/TauT family transport system ATP-binding protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1013_3
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2703..4004
|
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037AE248
rbh
Bicarbonate-binding protein {ECO:0000313|EMBL:KKB11655.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
nitrate transporter component, NrtA; K15576 nitrate/nitrite transport system substrate-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_1013_4
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4064..4957
|
bicarbonate ABC transporter permease n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EDFDD7
Bicarbonate ABC transporter permease {ECO:0000313|EMBL:KDR88113.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;"
nrtB; nitrate ABC transporter; K15577 nitrate/nitrite transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_1013_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4873..5496)
|
Putative uncharacterized protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2A477_RHIET
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1013_6
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5667..5789
|
nrtC; nitrate ABC transporter ATPase; K15578 nitrate/nitrite transport system ATP-binding protein [EC:3.6.3.-]
nitrate ABC transporter ATP-binding protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI0003759EE0
Cyanate ABC transporter, ATP-binding protein {ECO:0000313|EMBL:KFC68051.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1013_7
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5794..8244
|
Nitrite reductase (NAD(P)H) {ECO:0000313|EMBL:CDX27526.1}; EC=1.7.1.4 {ECO:0000313|EMBL:CDX27526.1};; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
nirB; nitrite reductase [NAD(P)H], large subunit protein; K00362 nitrite reductase (NAD(P)H) large subunit [EC:1.7.1.4]
rbh
PREDICTED: nitrite reductase [NAD(P)H]-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1013C
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1013_8
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8576..11251
|
Nitrate reductase {ECO:0000313|EMBL:CDX17682.1}; EC=1.7.99.4 {ECO:0000313|EMBL:CDX17682.1};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
Nitrate reductase n=3 Tax=Oligotropha carboxidovorans RepID=B6JE51_OLICO
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1013_9
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11223..12677
|
cysG2; multifunctional siroheme synthase CysG; K02302 uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
rbh
Multifunctional siroheme synthase CysG n=2 Tax=Oligotropha carboxidovorans RepID=B6JE50_OLICO
rbh
Multifunctional siroheme synthase CysG {ECO:0000313|EMBL:AEI05959.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1013_10
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12687..13883)
|
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TTL6_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:CCE09804.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1013_11
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13894..15042)
|
Acyl-CoA dehydrogenase-like n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TTL5_9BRAD
rbh
Acyl-CoA dehydrogenase-like {ECO:0000313|EMBL:CCE09803.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
putative acyl-CoA dehydrogenase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1013_12
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15438..17237)
|
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00036808D8
rbh
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKS33228.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
putative GGDEF family protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1013_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17575..17805)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P0K7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34966.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1013_14
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17892..18812)
|
membrane protein n=1 Tax=Afipia birgiae RepID=UPI0002EA8056
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS33221.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
permease
|
|
SCNpilot_expt_1000_bf_scaffold_1013_15
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18885..19241)
|
beta-lactamase n=1 Tax=Afipia birgiae RepID=UPI00036963E7
Uncharacterized protein {ECO:0000313|EMBL:EGP09018.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1013_16
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19244..20551)
|
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QIC6_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EGP09017.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1013_17
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20627..20959
|
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003120628
Uncharacterized protein {ECO:0000313|EMBL:EGP09016.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1013_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21010..21681
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P2L2_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34959.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1013_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21733..22299)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P9B9_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34958.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
putative polysaccharide biosynthesis/export; K01991 polysaccharide export outer membrane protein
|
|
SCNpilot_expt_1000_bf_scaffold_1013_20
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22375..23028)
|
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
methionine sulfoxide reductase A; K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P0M7_9BRAD
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1013_21
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23127..23444)
|
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8NXL9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS33214.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1013_22
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23766..24032
|
30S ribosomal protein S20 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P2K7_9BRAD
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
30S ribosomal protein S20
|
|
SCNpilot_expt_1000_bf_scaffold_1013_23
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25252..26715
|
Chromosomal replication initiator protein DnaA n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P9B5_9BRAD
rbh
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
dnaA; chromosomal replication initiation protein; K02313 chromosomal replication initiator protein
|
|
SCNpilot_expt_1000_bf_scaffold_1013_24
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26946..28064
|
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
DNA polymerase III subunit beta; K02338 DNA polymerase III subunit beta [EC:2.7.7.7]
DNA polymerase III subunit beta n=1 Tax=Afipia birgiae RepID=UPI0002E5B5B4
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1013_25
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28098..29237
|
DNA replication and repair protein RecF n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P0J4_9BRAD
rbh
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
recF; DNA replication and repair protein; K03629 DNA replication and repair protein RecF
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1013_26
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29581..32022
|
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
gyrB; DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3]
DNA gyrase subunit B n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P5J9_9BRAD
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1013_27
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32215..33636
|
multidrug transporter MatE n=1 Tax=Afipia birgiae RepID=UPI00031ECB4E
rbh
MATE efflux family protein {ECO:0000313|EMBL:EKS34948.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
multidrug efflux protein; K03327 multidrug resistance protein, MATE family
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1013_28
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33713..33937
|
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P0L5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS33205.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1013_29
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34060..35427
|
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NXK7_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS33204.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1013_30
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
35558..36934
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P2J6_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34944.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|