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SCNpilot_expt_1000_bf_scaffold_1185

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Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1185_1
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(431..1261)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PB51_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS35588.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
putative ABC transporter substrate-binding protein; K02067 putative ABC transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_1185_2
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1289..2059)
DNA (771bp) protein (257aa)
iron ABC transporter ATP-binding protein n=1 Tax=Afipia birgiae RepID=UPI0002F6FCD5 rbh
Methionine ABC transporter ATP-binding protein {ECO:0000313|EMBL:EGP06559.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
ABC transporter ATP-binding protein; K02065 putative ABC transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_1185_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2069..2587)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6I7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36349.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ABC transporter permease; K02066 putative ABC transport system permease protein
SCNpilot_expt_1000_bf_scaffold_1185_4
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2616..3215
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SW40_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD98417.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
SCNpilot_expt_1000_bf_scaffold_1185_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3594..4289
DNA (696bp) protein (232aa)
mandelate racemase n=1 Tax=Afipia birgiae RepID=UPI00030C82E4
Uncharacterized protein {ECO:0000313|EMBL:EKS36350.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
mandelate racemase/muconate lactonizing enzyme
SCNpilot_expt_1000_bf_scaffold_1185_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4346..5356)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4E4_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36351.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
major facilitator transporter; K05820 MFS transporter, PPP family, 3-phenylpropionic acid transporter
SCNpilot_expt_1000_bf_scaffold_1185_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5645..6694
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P190_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36352.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1185_8
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6761..7741)
DNA (981bp) protein (327aa)
Threonine dehydratase {ECO:0000313|EMBL:EGP06564.1}; EC=4.3.1.19 {ECO:0000313|EMBL:EGP06564.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
pyridoxal-5'-phosphate-dependent enzyme subunit beta; K01754 threonine dehydratase [EC:4.3.1.19]
Threonine dehydratase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QQF0_9BRAD rbh
SCNpilot_expt_1000_bf_scaffold_1185_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7941..9014)
DNA (1074bp) protein (358aa)
mgtA; GDP-mannose-dependent alpha-mannosyltransferase MgtA (EC:2.4.1.-)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P7G9_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS35595.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_expt_1000_bf_scaffold_1185_10
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9016..9828)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P2A0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS35596.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
metallophosphoesterase
SCNpilot_expt_1000_bf_scaffold_1185_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9871..10530)
DNA (660bp) protein (220aa)
phosphatidylethanolamine N-methyltransferase; K00551 phosphatidylethanolamine N-methyltransferase [EC:2.1.1.17] rbh
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4E8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36356.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_1185_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10828..11631)
DNA (804bp) protein (268aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7); K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] rbh
Phosphomethylpyrimidine kinase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P194_9BRAD rbh
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EKS36357.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_1185_13
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11973..12215
DNA (243bp) protein (81aa)
Transcriptional regulator, AsnC family n=2 Tax=Bradyrhizobiaceae RepID=F7QQF5_9BRAD
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EGP06569.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
AsnC family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1185_14
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12384..13361)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P7H6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS35600.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein; K15270 S-adenosylmethionine uptake transporter
SCNpilot_expt_1000_bf_scaffold_1185_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13625..14539)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P9U0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36360.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
putative diheme cytochrome c-553
SCNpilot_expt_1000_bf_scaffold_1185_16
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14721..15170)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002F50B0E
Uncharacterized protein {ECO:0000313|EMBL:EKS35602.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
cycF; cytochrome C
SCNpilot_expt_1000_bf_scaffold_1185_17
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15285..17591)
DNA (2307bp) protein (769aa)
Xanthine dehydrogenase family protein, large subunit n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QQG0_9BRAD rbh
Xanthine dehydrogenase family protein, large subunit {ECO:0000313|EMBL:EGP06574.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit rbh
SCNpilot_expt_1000_bf_scaffold_1185_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17673..19202)
DNA (1530bp) protein (510aa)
Integral membrane protein MviN n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6J9_9BRAD rbh
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
integral membrane protein MviN; K03980 virulence factor rbh
SCNpilot_expt_1000_bf_scaffold_1185_19
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19437..20582)
DNA (1146bp) protein (382aa)
aminotransferase DegT n=1 Tax=Afipia birgiae RepID=UPI00031CD3BF rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS35605.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
DegT/DnrJ/EryC1/StrS aminotransferase
SCNpilot_expt_1000_bf_scaffold_1185_20
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20619..21617)
DNA (999bp) protein (333aa)
oxidoreductase (EC:1.1.1.18) rbh
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P2B3_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS35606.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_expt_1000_bf_scaffold_1185_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21830..23242)
DNA (1413bp) protein (471aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22); K16011 mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] rbh
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P1A3_9BRAD rbh
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:EKS36367.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_1185_22
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23271..24284)
DNA (1014bp) protein (338aa)
NAD-dependent epimerase/dehydratase; K08679 UDP-glucuronate 4-epimerase [EC:5.1.3.6] rbh
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PDF8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36368.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_1185_23
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24500..25459
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P9U9_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36370.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K07027
SCNpilot_expt_1000_bf_scaffold_1185_24
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25642..26013)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P1D2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36402.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_1185_25
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26299..27315
DNA (1017bp) protein (339aa)
UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC:2.7.8.-) rbh
glycosyl transferase n=1 Tax=Afipia birgiae RepID=UPI00037978A3 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36404.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_1185_26
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27387..29243)
DNA (1857bp) protein (619aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P4I1_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS35639.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
polysaccharide biosynthesis protein CapD; K13013 O-antigen biosynthesis protein WbqV
SCNpilot_expt_1000_bf_scaffold_1185_27
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29240..30751)
DNA (1512bp) protein (504aa)
bifunctional ADP-heptose synthase; K03272 D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
Bifunctional protein HldE n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P2E9_9BRAD
Bifunctional protein HldE {ECO:0000256|HAMAP-Rule:MF_01603, ECO:0000256|SAAS:SAAS00015122}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_expt_1000_bf_scaffold_1185_28
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30772..31677)
DNA (906bp) protein (302aa)
ADP-L-glycero-D-manno-heptose-6-epimerase {ECO:0000256|SAAS:SAAS00055252}; EC=5.1.3.20 {ECO:0000256|SAAS:SAAS00055236};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein; K03274 ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
ADP-glyceromanno-heptose 6-epimerase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NZ78_9BRAD rbh
SCNpilot_expt_1000_bf_scaffold_1185_29
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31930..32469
DNA (540bp) protein (180aa)
ADP-heptose-lipooligosaccharide heptosyltransferase II {ECO:0000313|EMBL:EGP06619.1}; EC=2.4.1.- {ECO:0000313|EMBL:EGP06619.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
rfaF; ADP-heptose--LPS heptosyltransferase II (EC:2.-.-.-); K02843 heptosyltransferase II [EC:2.4.-.-]
ADP-heptose-lipooligosaccharide heptosyltransferase II n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QQK5_9BRAD
SCNpilot_expt_1000_bf_scaffold_1185_30
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32430..32963
DNA (534bp) protein (178aa)
ADP-heptose-lipooligosaccharide heptosyltransferase II {ECO:0000313|EMBL:EGP06619.1}; EC=2.4.1.- {ECO:0000313|EMBL:EGP06619.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
rfaF; lipopolysaccharide heptosyltransferase II (EC:2.4.-.-); K02843 heptosyltransferase II [EC:2.4.-.-]
ADP-heptose-lipooligosaccharide heptosyltransferase II n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QQK5_9BRAD
Displaying items 1-30 of 50 in total

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