name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1505_1
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..308)
|
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
ppi1; cyclophilin-type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QMR7_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_1505_2
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(563..1057)
|
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
coaD; phosphopantetheine adenylyltransferase CoaD (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
Phosphopantetheine adenylyltransferase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QMR6_9BRAD
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1505_3
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1219..1470
|
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QMR5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP07630.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1505_4
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1491..4211)
|
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
DNA gyrase subunit A n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QMR3_9BRAD
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1505_5
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4459..4947)
|
Single-stranded DNA-binding protein n=2 Tax=Bradyrhizobiaceae RepID=F7QMR1_9BRAD
rbh
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
single-stranded DNA-binding protein; K03111 single-strand DNA-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_1505_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5438..5773
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P667_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38087.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
outer membrane protein
|
|
SCNpilot_expt_1000_bf_scaffold_1505_7
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5721..6122
|
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PLK7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS40385.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
outer membrane protein
|
|
SCNpilot_expt_1000_bf_scaffold_1505_8
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6393..8078
|
UvrABC system protein A n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PHX1_9BRAD
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A
|
|
SCNpilot_expt_1000_bf_scaffold_1505_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8023..9357
|
UvrABC system protein A n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PHX1_9BRAD
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A
|
|
SCNpilot_expt_1000_bf_scaffold_1505_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9401..9676
|
acetyltransferase n=1 Tax=Afipia birgiae RepID=UPI0002F27061
Uncharacterized protein {ECO:0000313|EMBL:EKS38091.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K06975
|
|
SCNpilot_expt_1000_bf_scaffold_1505_11
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9705..9983
|
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8PFR4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS40381.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein; K06975
|
|
SCNpilot_expt_1000_bf_scaffold_1505_12
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10049..10840)
|
5-carboxymethyl-2-hydroxymuconate isomerase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036A5A86
Sulfonate transport system substrate-binding protein {ECO:0000313|EMBL:ERF85341.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1505_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11084..11449)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PBG9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38094.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1505_14
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11826..12728
|
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8PPV5_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS40378.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1505_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12792..13817)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P678_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS38097.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K09796 hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1505_16
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14692..14844
|
Uncharacterized protein n=3 Tax=Bradyrhizobiaceae RepID=K8PI94_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP07613.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1505_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14978..16414
|
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037};; Folate-dependent tRNA (uracil-5-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; Folate-dependent tRNA(M-5-U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
trmFO; tRNA (uracil-5-)-methyltransferase Gid (EC:2.1.1.-); K04094 methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
rbh
tRNA (uracil-5-)-methyltransferase n=1 Tax=Afipia birgiae RepID=UPI0002DFE1C5
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1505_18
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16585..17274
|
hypothetical protein; K15256 tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
Uncharacterized protein n=2 Tax=Rhizobium meliloti RepID=F7XAS1_SINMM
Methyltransferase {ECO:0000313|EMBL:KKB78441.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1505_19
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17285..18145)
|
phytoene synthase; K02291 phytoene synthase [EC:2.5.1.32]
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PPV1_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS40373.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1505_20
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18142..18525)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P683_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38102.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K09008 hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1505_21
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18522..19547)
|
Protein-export membrane protein SecF n=2 Tax=Bradyrhizobiaceae RepID=F7QMP4_9BRAD
rbh
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
secF; protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF
|
|
SCNpilot_expt_1000_bf_scaffold_1505_22
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19564..20586)
|
Protein translocase subunit SecD n=2 Tax=Bradyrhizobiaceae RepID=F7QMP3_9BRAD
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD
|
|
SCNpilot_expt_1000_bf_scaffold_1505_23
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21187..21558)
|
Preprotein translocase subunit YajC n=2 Tax=Bradyrhizobiaceae RepID=F7QMP2_9BRAD
Preprotein translocase subunit YajC {ECO:0000313|EMBL:EGP07607.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC
|
|
SCNpilot_expt_1000_bf_scaffold_1505_24
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21754..22749
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P9A3_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS38106.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ATP-dependent protease subunit; K06923
|
|
SCNpilot_expt_1000_bf_scaffold_1505_25
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22822..24195)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P687_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS38107.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
peptidase M23B
|
|
SCNpilot_expt_1000_bf_scaffold_1505_26
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24300..24953)
|
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000256|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; Protein L-isoaspartyl methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; Protein-beta-aspartate methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PIA2_9BRAD
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1505_27
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25147..25530
|
chemotaxis protein CheY n=1 Tax=Afipia birgiae RepID=UPI0002F0B048
Uncharacterized protein {ECO:0000313|EMBL:EKS40364.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
response regulator receiver domain-containing protein
|
|
SCNpilot_expt_1000_bf_scaffold_1505_28
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25677..26444)
|
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
stationary phase survival protein SurE n=1 Tax=Afipia birgiae RepID=UPI0002D724A3
rbh
5'-nucleotidase SurE
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1505_29
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26593..28098)
|
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11]
Serine--tRNA ligase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PCK6_9BRAD
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1505_30
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28352..29206)
|
Sec-independent protein translocase protein TatC n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PIA8_9BRAD
rbh
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Sec-independent protein translocase TatC; K03118 sec-independent protein translocase protein TatC
rbh
|