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SCNpilot_expt_1000_bf_scaffold_1556

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1556_1
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..226
DNA (225bp) protein (75aa)
mvrA; ferredoxin NADP+ reductase; K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2]
Ferredoxin--NADP(+) reductase n=2 Tax=Bradyrhizobiaceae RepID=F7QKQ2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42588.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_expt_1000_bf_scaffold_1556_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

306..1634
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PTU4_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41758.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
lipopolysaccharide biosynthesis
SCNpilot_expt_1000_bf_scaffold_1556_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1813..3447
DNA (1635bp) protein (545aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PLX1_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41759.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
inorganic phosphate transporter; K03306 inorganic phosphate transporter, PiT family rbh
SCNpilot_expt_1000_bf_scaffold_1556_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3631..4803)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PQH4_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41760.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
patatin; K07001 NTE family protein rbh
SCNpilot_expt_1000_bf_scaffold_1556_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5068..5850
DNA (783bp) protein (261aa)
3-hydroxybutyrate dehydrogenase; K00019 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
3-hydroxybutyrate dehydrogenase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PJP9_9BRAD rbh
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:EKS41761.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_1556_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5865..6638
DNA (774bp) protein (258aa)
acetoacetate decarboxylase (EC:4.1.1.4); K01574 acetoacetate decarboxylase [EC:4.1.1.4] rbh
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGL6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41762.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_1556_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6752..7783
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PTU8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41763.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Mg2+ transporter protein, CorA-like; K16074 zinc transporter rbh
SCNpilot_expt_1000_bf_scaffold_1556_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7795..9159
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PLX6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41764.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
carbohydrate porin, OprB family; K07267 porin rbh
SCNpilot_expt_1000_bf_scaffold_1556_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9162..9947)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PLS2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42536.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
enoyl-CoA hydratase/isomerase
SCNpilot_expt_1000_bf_scaffold_1556_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9975..11135)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PJQ4_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41766.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
acyl-CoA dehydrogenase domain-containing protein
SCNpilot_expt_1000_bf_scaffold_1556_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11148..12206)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGL8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41767.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1556_12
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12543..13973
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PLS7_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42541.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
aldehyde dehydrogenase
SCNpilot_expt_1000_bf_scaffold_1556_13
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14441..15079
DNA (639bp) protein (213aa)
Aldo/keto reductase n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5MN77_9RHIZ
Aldo/keto reductase {ECO:0000313|EMBL:EJT03690.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
aldo/keto reductase
SCNpilot_expt_1000_bf_scaffold_1556_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15113..17947)
DNA (2835bp) protein (945aa)
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
bifunctional transaldolase/phosoglucose isomerase; K13810 transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9]
phosoglucose isomerase n=1 Tax=Afipia birgiae RepID=UPI00030DCEF7 rbh
SCNpilot_expt_1000_bf_scaffold_1556_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18786..19376
DNA (591bp) protein (197aa)
membrane protein n=1 Tax=Afipia birgiae RepID=UPI00031434A0
Uncharacterized protein {ECO:0000313|EMBL:EKS41771.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K07112
SCNpilot_expt_1000_bf_scaffold_1556_16
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19453..19926
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKK9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP08378.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein; K09004 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1556_17
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19938..21047)
DNA (1110bp) protein (370aa)
lipocalin n=1 Tax=Afipia birgiae RepID=UPI0002DE7758 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42546.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein; K07112 rbh
SCNpilot_expt_1000_bf_scaffold_1556_18
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21122..21499)
DNA (378bp) protein (126aa)
Transcriptional regulator SoxR n=2 Tax=Bradyrhizobiaceae RepID=F7QKL1_9BRAD
Transcriptional regulator SoxR {ECO:0000313|EMBL:EGP08380.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
ArsR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1556_19
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21528..21983)
DNA (456bp) protein (152aa)
regulatory protein SoxS n=1 Tax=Afipia birgiae RepID=UPI000371CFC5
Uncharacterized protein {ECO:0000313|EMBL:EKS42548.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1556_20
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21988..22713
DNA (726bp) protein (242aa)
cytochrome C biogenesis protein n=1 Tax=Afipia birgiae RepID=UPI00037A094B rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41776.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cytochrome c biogenesis protein, transmembrane region; K06196 cytochrome c-type biogenesis protein rbh
SCNpilot_expt_1000_bf_scaffold_1556_21
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22726..23313
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PSN6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42550.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
thioredoxin-like protein rbh
Displaying 21 items

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