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SCNpilot_expt_1000_bf_scaffold_1630

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1630_1
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..210)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NW13_9BRAD
Antiholin-like protein LrgA {ECO:0000313|EMBL:EGP08794.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
LrgA family protein
SCNpilot_expt_1000_bf_scaffold_1630_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(307..1113)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PNB0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS40990.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1630_3
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1254..1736)
DNA (483bp) protein (161aa)
signal peptide protein n=1 Tax=Afipia birgiae RepID=UPI0003181744
Uncharacterized protein {ECO:0000313|EMBL:EGP08792.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1630_4
unknown

Not on your lists

comp(1733..2359)
DNA (627bp) protein (209aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1630_5
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2364..3458
DNA (1095bp) protein (365aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QJ06_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EGP08790.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein; K07120 rbh
SCNpilot_expt_1000_bf_scaffold_1630_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3462..3992)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PHF1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS40986.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
disulfide bond formation protein DsbB
SCNpilot_expt_1000_bf_scaffold_1630_7
unknown

Not on your lists

comp(4061..4219)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1630_8
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4448..4837
DNA (390bp) protein (130aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8NZ09_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP08788.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1630_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4917..5690)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P2I6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS32648.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1630_10
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5722..6690)
DNA (969bp) protein (323aa)
hypothetical protein; K00459 nitronate monooxygenase [EC:1.13.12.16]
2-nitropropane dioxygenase-like protein n=2 Tax=Bradyrhizobiaceae RepID=F7QJ01_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS32647.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_expt_1000_bf_scaffold_1630_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6955..7518)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6J7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34053.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1630_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7565..8146)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NZX7_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34054.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
DedA integral membrane protein
SCNpilot_expt_1000_bf_scaffold_1630_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8209..8670)
DNA (462bp) protein (154aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071044};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
his2; phosphoribosyl-ATP pyrophosphohydrolase; K01523 phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
Phosphoribosyl-ATP pyrophosphatase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P2W7_9BRAD
SCNpilot_expt_1000_bf_scaffold_1630_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8796..9188)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NXY7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34056.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1630_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9466..10512
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00036EF054 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34057.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
signal peptide rbh
SCNpilot_expt_1000_bf_scaffold_1630_16
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10708..12693)
DNA (1986bp) protein (662aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P2Y0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34065.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1630_17
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12905..13216
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T593_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE01620.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1630_18
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13243..14712
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TZJ2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CCE11880.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein rbh
SCNpilot_expt_1000_bf_scaffold_1630_19
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14954..16750
DNA (1797bp) protein (599aa)
Beta-(1-->2)glucan export ATP-binding/permease protein NdvA {ECO:0000256|HAMAP-Rule:MF_01728}; EC=3.6.3.42 {ECO:0000256|HAMAP-Rule:MF_01728};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
Beta-(1-2)glucan export ATP-binding/permease NdvA n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NQI3_9BRAD
cyclic beta-1,2-glucan ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial
SCNpilot_expt_1000_bf_scaffold_1630_20
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17107..18240
DNA (1134bp) protein (378aa)
Serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4); K01286 D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6L3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34068.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_1630_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18213..18644
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6L3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34068.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
algP; transcriptional regulatory protein AlgP
SCNpilot_expt_1000_bf_scaffold_1630_22
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19011..20705
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NZY9_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34069.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
long-chain-fatty-acid-CoA ligase
SCNpilot_expt_1000_bf_scaffold_1630_23
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21013..21564
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NY02_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34071.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1630_24
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21888..23255
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NUS0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34072.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
polysaccharide biosynthesis protein
SCNpilot_expt_1000_bf_scaffold_1630_25
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23387..24175)
DNA (789bp) protein (263aa)
bdhA; 3-hydroxybutyrate dehydrogenase; K00019 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] rbh
3-hydroxybutyrate dehydrogenase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6L8_9BRAD rbh
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:EKS34073.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_1630_26
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24189..25217)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NZZ4_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34074.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
patatin-like phospholipase; K07001 NTE family protein
SCNpilot_expt_1000_bf_scaffold_1630_27
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25425..25928)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P2Z5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34075.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1630_28
unknown

Not on your lists

26182..26298
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1630_29
unknown

Not on your lists

26301..26507
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1630_30
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26537..27076)
DNA (540bp) protein (180aa)
Sulfate/thiosulfate import ATP-binding protein CysA {ECO:0000256|HAMAP-Rule:MF_01701}; EC=3.6.3.25 {ECO:0000256|HAMAP-Rule:MF_01701};; Sulfate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01701}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cysA1; sulfate ABC transporter ATP-binding protein; K02045 sulfate transport system ATP-binding protein [EC:3.6.3.25]
Sulfate/thiosulfate import ATP-binding protein CysA n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NY07_9BRAD
Displaying items 1-30 of 82 in total

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