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SCNpilot_expt_1000_bf_scaffold_1904

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1904_1
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..569
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P4Y6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS35764.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1904_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(964..1158)
DNA (195bp) protein (65aa)
Cytochrome oxidase maturation protein, cbb3-type n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PAY9_9BRAD
Cytochrome oxidase maturation protein, cbb3-type {ECO:0000313|EMBL:EKS36745.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cytochrome oxidase maturation protein, cbb3-type
SCNpilot_expt_1000_bf_scaffold_1904_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1158..3434)
DNA (2277bp) protein (759aa)
fixI; nitrogen fixation protein FixI (EC:3.6.3.-)
Copper-translocating P-type ATPase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7N2_9BRAD rbh
Copper-translocating P-type ATPase {ECO:0000313|EMBL:EKS36744.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_1904_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3487..4278)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PEI8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36743.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
putative cytochrome c oxidase subunit I
SCNpilot_expt_1000_bf_scaffold_1904_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4285..4527)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P2H3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36742.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1904_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4524..5402)
DNA (879bp) protein (293aa)
Cbb3-type cytochrome c oxidase subunit n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P5M3_9BRAD rbh
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cbb3-type cytochrome oxidase, subunit CcoP
SCNpilot_expt_1000_bf_scaffold_1904_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5393..5563)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PAY4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36740.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cbb3-type cytochrome oxidase, subunit CcoQ
SCNpilot_expt_1000_bf_scaffold_1904_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5566..6297)
DNA (732bp) protein (244aa)
Cytochrome c oxidase, cbb3-type, subunit II n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7M9_9BRAD rbh
Cytochrome c oxidase, cbb3-type, subunit II {ECO:0000313|EMBL:EKS36739.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ccoO2; cbb3-type cytochrome oxidase, subunit CcoO; K00405 cytochrome c oxidase cbb3-type subunit II
SCNpilot_expt_1000_bf_scaffold_1904_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6303..7955)
DNA (1653bp) protein (551aa)
ccoN; cbb3-type cytochrome c oxidase subunit I (EC:1.9.3.1); K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1]
Cytochrome c oxidase, cbb3-type, subunit I n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PEI5_9BRAD rbh
Cytochrome c oxidase, cbb3-type, subunit I {ECO:0000313|EMBL:EKS36738.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_1904_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8330..8758
DNA (429bp) protein (143aa)
Rrf2 family protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P2H0_9BRAD
Rrf2 family protein {ECO:0000313|EMBL:EKS36737.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
nsrR; HTH-type transcriptional regulator; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
SCNpilot_expt_1000_bf_scaffold_1904_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8785..9288
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P5L9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36736.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
globin; K06886 hemoglobin
SCNpilot_expt_1000_bf_scaffold_1904_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9263..9715)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PAY0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36735.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_1904_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9875..10618
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7M5_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36734.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Crp/Fnr family transcriptional regulator; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein
SCNpilot_expt_1000_bf_scaffold_1904_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10680..10919)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PTT4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41743.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1904_15
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11037..11738)
DNA (702bp) protein (234aa)
Response regulator n=2 Tax=Oligotropha carboxidovorans RepID=B6JJK3_OLICO
response regulator protein
Response regulator protein {ECO:0000313|EMBL:AEI05365.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_expt_1000_bf_scaffold_1904_16
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11837..12250)
DNA (414bp) protein (138aa)
ATPase family protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BKJ3_OLICM
ATPase family protein
ATPase family protein {ECO:0000313|EMBL:AEI05366.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Displaying 16 items

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