name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_3704_1
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..305
|
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PB88_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38806.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
patatin
|
|
SCNpilot_expt_1000_bf_scaffold_3704_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
365..1207
|
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-); K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PFK4_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_3704_3
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1182..1844
|
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-); K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QP21_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_3704_4
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2440..2547
|
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TDH9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE04517.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_3704_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3386..3652
|
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003029D0E
Uncharacterized protein {ECO:0000313|EMBL:EKS38338.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K07126
|
|
SCNpilot_expt_1000_bf_scaffold_3704_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3655..4311)
|
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA04_9BRAD
Cellulose synthase operon protein C {ECO:0000313|EMBL:CEG07762.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_3704_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4292..5173)
|
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA04_9BRAD
Cellulose synthase operon protein C {ECO:0000313|EMBL:CEG07762.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
putative O-linked N-acetylglucosamine transferase, SPINDLY family
|
|
SCNpilot_expt_1000_bf_scaffold_3704_8
unknown
|
Not on your lists |
5368..5652
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3704_9
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6678..8183
|
Putative outer membrane protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QP18_9BRAD
rbh
Putative outer membrane protein {ECO:0000313|EMBL:EGP07101.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
putative Omp2b porin
|
|
SCNpilot_expt_1000_bf_scaffold_3704_10
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8565..9461)
|
hydrolase n=1 Tax=Afipia birgiae RepID=UPI0002E98D46
rbh
Alpha/beta hydrolase fold-containing protein {ECO:0000313|EMBL:EGP07100.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
putative hydrolase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3704_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9618..11609)
|
lytic transglycosylase; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-]
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PC84_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS38334.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3704_12
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12061..12951
|
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
4-hydroxy-tetrahydrodipicolinate synthase n=2 Tax=Bradyrhizobiaceae RepID=F7QP15_9BRAD
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3704_13
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12978..13343
|
Large-conductance mechanosensitive channel n=2 Tax=Bradyrhizobiaceae RepID=F7QP14_9BRAD
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
large-conductance mechanosensitive channel
|
|
SCNpilot_expt_1000_bf_scaffold_3704_14
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13528..14001
|
SsrA-binding protein n=2 Tax=Oligotropha carboxidovorans RepID=SSRP_OLICO
smpB; SsrA-binding protein; K03664 SsrA-binding protein
SsrA-binding protein {ECO:0000255|HAMAP-Rule:MF_00023}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_expt_1000_bf_scaffold_3704_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14054..14629
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PFJ4_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS38330.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
bcpB; BcpB protein
|
|
SCNpilot_expt_1000_bf_scaffold_3704_16
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14626..15351)
|
Eracil-DNA glycosylase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QP11_9BRAD
rbh
Eracil-DNA glycosylase {ECO:0000313|EMBL:EGP07094.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
uracil-DNA glycosylase superfamily protein
|
|
SCNpilot_expt_1000_bf_scaffold_3704_17
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15477..16103)
|
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PDJ9_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS38794.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_3704_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16446..16838
|
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATC
rnpO; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6); K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
DNA-directed RNA polymerase subunit omega n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6W3_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_3704_19
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17013..19292
|
(p)ppGpp synthetase I SpoT/RelA; K00951 GTP pyrophosphokinase [EC:2.7.6.5]
RelA/SpoT family protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P8B8_9BRAD
rbh
RelA/SpoT family protein {ECO:0000313|EMBL:EKS38792.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3704_20
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19323..20090
|
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
pdxJ; pyridoxal phosphate biosynthetic protein PdxJ; K03474 pyridoxine 5-phosphate synthase [EC:2.6.99.2]
rbh
Pyridoxine 5'-phosphate synthase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PB76_9BRAD
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3704_21
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20139..20507
|
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071085}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071082};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
acpS; 4'-phosphopantetheinyl transferase (EC:2.7.8.7); K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
4''''-phosphopantetheinyl transferase n=1 Tax=Afipia birgiae RepID=UPI00031F0454
|
|
SCNpilot_expt_1000_bf_scaffold_3704_22
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20715..21473
|
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
Signal peptidase I n=2 Tax=Bradyrhizobiaceae RepID=F7QP04_9BRAD
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3704_23
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21470..22282
|
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Ribonuclease 3 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6V9_9BRAD
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3704_24
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22275..23198
|
GTPase Era n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P9X9_9BRAD
rbh
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
era; GTP-binding protein Era; K03595 GTP-binding protein Era
|
|
SCNpilot_expt_1000_bf_scaffold_3704_25
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23195..23596
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PFI6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38320.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_3704_26
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23643..24392
|
DNA repair protein RecO n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PGY5_9BRAD
rbh
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
recO; DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O)
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3704_27
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24465..26717
|
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00936};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
DNA topoisomerase 4 subunit A n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PDJ0_9BRAD
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3704_28
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26727..27671)
|
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IV36_RHOP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD07924.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
|
|
SCNpilot_expt_1000_bf_scaffold_3704_29
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28032..28526
|
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PK96_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS38783.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
virR; protein VirR
|
|
SCNpilot_expt_1000_bf_scaffold_3704_30
unknown
|
Not on your lists |
28523..28633
|
This feature has no annotations |