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SCNpilot_expt_1000_bf_scaffold_3837

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3837_1
unknown

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comp(2..169)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3837_2
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(696..1127)
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8P570_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS33593.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3837_3
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1270..1980)
DNA (711bp) protein (237aa)
MgtC/SapB transporter n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5N3_9BRAD
Methyltransferase {ECO:0000313|EMBL:KJC49079.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
MgtC family protein; K07507 putative Mg2+ transporter-C (MgtC) family protein
SCNpilot_expt_1000_bf_scaffold_3837_4
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2230..3072
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NYM0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS33594.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_3837_5
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3250..4137
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000319ABC2 rbh
Uncharacterized protein {ECO:0000313|EMBL:EGP09766.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_3837_6
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4211..5827)
DNA (1617bp) protein (539aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
phosphoenolpyruvate carboxykinase (EC:4.1.1.49); K01610 phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QGA7_9BRAD rbh
SCNpilot_expt_1000_bf_scaffold_3837_7
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6055..6792)
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QGA9_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EGP09773.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein; K07226 hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_3837_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7543..7776
DNA (234bp) protein (78aa)
Transcriptional regulatory protein ChvI n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P8Y1_9BRAD
Transcriptional regulatory protein ChvI {ECO:0000313|EMBL:EKS37234.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
two component transcriptional regulator; K14981 two-component system, OmpR family, response regulator ChvI
SCNpilot_expt_1000_bf_scaffold_3837_9
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8016..9776
DNA (1761bp) protein (587aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
chvG; sensor protein ChvG (EC:2.7.13.3); K14980 two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
histidine kinase n=1 Tax=Afipia birgiae RepID=UPI0003149372 rbh
SCNpilot_expt_1000_bf_scaffold_3837_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9773..10219
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6Z3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37236.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
putative HPr kinase/phosphorylase
SCNpilot_expt_1000_bf_scaffold_3837_11
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10430..10831
DNA (402bp) protein (134aa)
PTS system fructose subfamily IIA component; K02793 PTS system, mannose-specific IIA component [EC:2.7.1.69]
Nitrogen regulatory protein n=2 Tax=Bradyrhizobiaceae RepID=F7QGB3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS33605.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_expt_1000_bf_scaffold_3837_12
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10828..11142
DNA (315bp) protein (105aa)
Phosphocarrier protein n=2 Tax=Bradyrhizobiaceae RepID=F7QGB4_9BRAD
HPr family phosphocarrier {ECO:0000313|EMBL:EKS33606.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
phosphotransferase system, phosphocarrier HPr protein; K11189 phosphocarrier protein
SCNpilot_expt_1000_bf_scaffold_3837_13
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11203..11484)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003803940
Uncharacterized protein {ECO:0000313|EMBL:EGP09779.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3837_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11545..12108)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003803940
Uncharacterized protein {ECO:0000313|EMBL:EKS37239.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3837_15
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12086..12895)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NTE2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS33607.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3837_16
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13048..13812
DNA (765bp) protein (255aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
Elongation factor 4 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PCC3_9BRAD
GTP-binding protein LepA; K03596 GTP-binding protein LepA
SCNpilot_expt_1000_bf_scaffold_3837_17
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13796..14572
DNA (777bp) protein (259aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
Elongation factor 4 n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QGB6_9BRAD
lepA; GTP-binding protein LepA; K03596 GTP-binding protein LepA
Displaying 17 items

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