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SCNpilot_expt_1000_bf_scaffold_7163

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7163_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..342
DNA (342bp) protein (114aa)
GTPase HflX n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PE91_9BRAD
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
HSR1-like GTP-binding protein; K03665 GTP-binding protein HflX
SCNpilot_expt_1000_bf_scaffold_7163_2
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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450..1886
DNA (1437bp) protein (479aa)
succinate-semialdehyde dehydrogenase (NAD(P)+) (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Succinate semialdehyde dehydrogenase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QM89_NITHX
Aldehyde dehydrogenase {ECO:0000313|EMBL:KGT80281.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
SCNpilot_expt_1000_bf_scaffold_7163_3
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2152..2898
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4R5H1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESR27197.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
SCNpilot_expt_1000_bf_scaffold_7163_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2873..3403)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PIV6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41471.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_expt_1000_bf_scaffold_7163_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3391..3879)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PIV6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41471.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
short chain dehydrogenase
SCNpilot_expt_1000_bf_scaffold_7163_6
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3969..4691
DNA (723bp) protein (241aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
7-cyano-7-deazaguanine synthase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PNL9_9BRAD rbh
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_7163_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4691..5248
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGI2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39869.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_7163_8
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5268..5519
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PKA5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39955.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein; K09984 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_7163_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5525..6094)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PGQ1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39954.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
putative Staphylococcus nuclease-like protein (SNase-like)
SCNpilot_expt_1000_bf_scaffold_7163_10
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6230..6499
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QN25_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP07240.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
SCNpilot_expt_1000_bf_scaffold_7163_11
unknown

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comp(7099..7338)
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7163_12
unknown

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comp(7729..8370)
DNA (642bp) protein (214aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7163_13
unknown

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comp(8485..8865)
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7163_14
unknown

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comp(9139..9567)
DNA (429bp) protein (143aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7163_15
unknown

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comp(9592..10257)
DNA (666bp) protein (222aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7163_16
unknown

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comp(10258..10494)
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7163_17
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10699..11190
DNA (492bp) protein (164aa)
hypothetical protein, partial n=1 Tax=Pseudomonas nitroreducens RepID=UPI00035F5EE1
Uncharacterized protein {ECO:0000313|EMBL:ETM68693.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;"
rtxA; structural toxin protein RtxA
Displaying 17 items

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