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SCNpilot_expt_1000_bf_scaffold_2082

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2082_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..241
DNA (240bp) protein (80aa)
PepSY-associated TM helix domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IE31_9BURK
PepSY-associated TM helix domain-containing protein
PepSY-associated TM helix domain-containing protein {ECO:0000313|EMBL:AFU47606.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2082_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

554..2062
DNA (1509bp) protein (503aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Histidine kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3F3_9BURK rbh
histidine kinase rbh
SCNpilot_expt_1000_bf_scaffold_2082_3
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2364..2936
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TM67_ACIAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM32055.1}; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
SCNpilot_expt_1000_bf_scaffold_2082_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3042..4679)
DNA (1638bp) protein (546aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXA7_9BURK rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:AFU47608.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
binding-protein-dependent transport system inner membrane protein rbh
SCNpilot_expt_1000_bf_scaffold_2082_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4801..5865
DNA (1065bp) protein (355aa)
Fe(3+)-transporting ATPase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I8Q1_9BURK rbh
Fe(3+)-transporting ATPase rbh
Fe(3+)-transporting ATPase {ECO:0000313|EMBL:AFU47609.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2082_6
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5950..7182)
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377095 rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_2082_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7372..8109)
DNA (738bp) protein (246aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IE37_9BURK rbh
phospholipid/glycerol acyltransferase rbh
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:AFU47616.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2082_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8137..9432)
DNA (1296bp) protein (432aa)
Amidohydrolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3F8_9BURK rbh
amidohydrolase rbh
Amidohydrolase {ECO:0000313|EMBL:AFU47617.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2082_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9485..10474)
DNA (990bp) protein (330aa)
pyrB; aspartate carbamoyltransferase catalytic subunit (EC:2.1.3.2) rbh
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Aspartate carbamoyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXB2_9BURK rbh
SCNpilot_expt_1000_bf_scaffold_2082_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10487..11011)
DNA (525bp) protein (175aa)
Phosphoribosyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I8Q7_9BURK rbh
phosphoribosyltransferase rbh
Phosphoribosyltransferase {ECO:0000313|EMBL:AFU47619.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2082_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11008..11325)
DNA (318bp) protein (106aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Putative Holliday junction resolvase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4Z7_9BURK
holliday junction resolvase-like protein
SCNpilot_expt_1000_bf_scaffold_2082_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11366..12049)
DNA (684bp) protein (228aa)
UPF0301 protein C380_19635 n=1 Tax=Acidovorax sp. KKS102 RepID=K0IE40_9BURK rbh
hypothetical protein rbh
UPF0301 protein C380_19635 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2082_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12071..13555
DNA (1485bp) protein (495aa)
Deoxyribodipyrimidine photo-lyase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3G0_9BURK rbh
deoxyribodipyrimidine photo-lyase rbh
Deoxyribodipyrimidine photo-lyase {ECO:0000313|EMBL:AFU47622.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2082_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13591..14790)
DNA (1200bp) protein (400aa)
Twitching motility protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXB6_9BURK rbh
twitching motility protein rbh
Twitching motility protein {ECO:0000313|EMBL:AFU47623.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2082_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14872..19023)
DNA (4152bp) protein (1384aa)
CheA signal transduction histidine kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I8Q9_9BURK rbh
CheA signal transduction histidine kinase rbh
CheA signal transduction histidine kinase {ECO:0000313|EMBL:AFU47624.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2082_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18971..21133)
DNA (2163bp) protein (721aa)
CheA signal transduction histidine kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I8Q9_9BURK
CheA signal transduction histidine kinase {ECO:0000313|EMBL:AFU47624.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
CheA signal transduction histidine kinase
SCNpilot_expt_1000_bf_scaffold_2082_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21185..23473)
DNA (2289bp) protein (763aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Acidovorax sp. KKS102 RepID=K0I500_9BURK rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:AFU47625.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
methyl-accepting chemotaxis sensory transducer rbh
SCNpilot_expt_1000_bf_scaffold_2082_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23495..24022)
DNA (528bp) protein (176aa)
Putative CheW protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IE43_9BURK rbh
CheW protein rbh
Putative CheW protein {ECO:0000313|EMBL:AFU47626.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2082_19
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24038..24403)
DNA (366bp) protein (122aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Acidovorax sp. CF316 RepID=J0KPX3_9BURK
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:EJE53228.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
response regulator receiver protein
SCNpilot_expt_1000_bf_scaffold_2082_20
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24403..24801)
DNA (399bp) protein (133aa)
Response regulator receiver protein n=2 Tax=Acidovorax RepID=C5T536_ACIDE
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AFU47628.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2082_21
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25129..26088
DNA (960bp) protein (320aa)
Phosphomethylpyrimidine kinase type-1 n=1 Tax=Acidovorax sp. KKS102 RepID=K0I502_9BURK rbh
phosphomethylpyrimidine kinase type-1 rbh
Phosphomethylpyrimidine kinase type-1 {ECO:0000313|EMBL:AFU47630.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2082_22
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26072..27382
DNA (1311bp) protein (437aa)
glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8) rbh
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IE47_9BURK rbh
SCNpilot_expt_1000_bf_scaffold_2082_23
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27483..28262)
DNA (780bp) protein (260aa)
IclR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3G4_9BURK rbh
IclR family transcriptional regulator rbh
IclR family transcriptional regulator {ECO:0000313|EMBL:AFU47632.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2082_24
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28520..29704
DNA (1185bp) protein (395aa)
4-hydroxybenzoate 3-monooxygenase (EC:1.14.13.2) rbh
4-hydroxybenzoate 3-monooxygenase {ECO:0000313|EMBL:AFU47633.1}; EC=1.14.13.2 {ECO:0000313|EMBL:AFU47633.1};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
4-hydroxybenzoate 3-monooxygenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXC2_9BURK rbh
SCNpilot_expt_1000_bf_scaffold_2082_25
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29724..30203)
DNA (480bp) protein (160aa)
Cytochrome c class I n=1 Tax=Acidovorax sp. KKS102 RepID=K0I8R5_9BURK rbh
cytochrome c class I rbh
Cytochrome c class I {ECO:0000313|EMBL:AFU47634.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2082_26
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30245..30520)
DNA (276bp) protein (92aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:3.5.4.10)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0Q7_9BURK
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_2082_27
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30727..31881
DNA (1155bp) protein (385aa)
Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei (strain 1710b) RepID=Q3JNS9_BURP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA48884.1}; TaxID=320372 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (strain 1710b).;"
SCNpilot_expt_1000_bf_scaffold_2082_28
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31938..32171)
DNA (234bp) protein (78aa)
Fis family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0IE50_9BURK
Fis family transcriptional regulator
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_2082_29
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32168..33214)
DNA (1047bp) protein (349aa)
tRNA-dihydrouridine synthase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0Q9_9BURK rbh
nifR3 family TIM-barrel protein rbh
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_2082_30
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33409..33993)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXC6_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU47638.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying items 1-30 of 44 in total

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