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SCNpilot_expt_1000_bf_scaffold_2209

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2209_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1667)
DNA (1665bp) protein (555aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Pyruvate dehydrogenase E1 component n=1 Tax=Acidovorax sp. KKS102 RepID=K0HSP6_9BURK
aceE; pyruvate dehydrogenase subunit E1
SCNpilot_expt_1000_bf_scaffold_2209_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1781..2902
DNA (1122bp) protein (374aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Signal transduction histidine kinase n=2 Tax=Acidovorax sp. KKS102 RepID=Q1HAX1_9BURK
bphP; multi-sensor signal transduction histidine kinase BphP
SCNpilot_expt_1000_bf_scaffold_2209_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2878..4392
DNA (1515bp) protein (505aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Signal transduction histidine kinase n=2 Tax=Acidovorax sp. KKS102 RepID=Q1HAX1_9BURK
bphP; multi-sensor signal transduction histidine kinase BphP
SCNpilot_expt_1000_bf_scaffold_2209_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4389..5015
DNA (627bp) protein (209aa)
Response regulator involved in catabolite control n=1 Tax=Acidovorax sp. KKS102 RepID=Q1HAX0_9BURK rbh
bphQ; response regulator receiver protein BphQ rbh
Response regulator involved in catabolite control {ECO:0000313|EMBL:BAE94501.1}; Response regulator receiver protein BphQ {ECO:0000313|EMBL:AFU45981.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2209_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5088..5942
DNA (855bp) protein (285aa)
5,10-methylene-tetrahydrofolate dehydrogenase n=1 Tax=Acidovorax radicis RepID=UPI00023773F8 rbh
methenyltetrahydrofolate cyclohydrolase rbh
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2209_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6012..6305
DNA (294bp) protein (98aa)
Oligopeptidase A n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4B0_9BURK
oligopeptidase A
Oligopeptidase A {ECO:0000313|EMBL:AFU45979.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2209_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6385..8043
DNA (1659bp) protein (553aa)
Oligopeptidase A n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4B0_9BURK
Oligopeptidase A {ECO:0000313|EMBL:AFU45979.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
oligopeptidase A
SCNpilot_expt_1000_bf_scaffold_2209_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8112..8768
DNA (657bp) protein (219aa)
Glutaredoxin n=1 Tax=Acidovorax sp. KKS102 RepID=K0HSP0_9BURK rbh
glutaredoxin rbh
Glutaredoxin {ECO:0000313|EMBL:AFU45978.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2209_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8915..9604)
DNA (690bp) protein (230aa)
ribose-5-phosphate isomerase A (EC:5.3.1.6) rbh
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Ribose-5-phosphate isomerase A n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYL3_9BURK rbh
SCNpilot_expt_1000_bf_scaffold_2209_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9641..10696
DNA (1056bp) protein (352aa)
dihydroorotate dehydrogenase 2 (EC:1.3.98.1) rbh
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dihydroorotate oxidase {ECO:0000256|HAMAP-Rule:MF_00225}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Acidovorax sp. KKS102 RepID=K0IA26_9BURK rbh
SCNpilot_expt_1000_bf_scaffold_2209_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10813..11151)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I135_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU45975.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2209_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11148..11543)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4A3_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU45974.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2209_13
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11596..11898)
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Acidovorax RepID=K0HSN3_9BURK
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_2209_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12044..13141)
DNA (1098bp) protein (366aa)
FAD dependent oxidoreductase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYK4_9BURK rbh
FAD dependent oxidoreductase rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:AFU45972.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2209_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13181..14218)
DNA (1038bp) protein (346aa)
Histone deacetylase superfamily protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IA23_9BURK rbh
histone deacetylase superfamily protein rbh
Histone deacetylase superfamily protein {ECO:0000313|EMBL:AFU45971.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2209_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14487..15200)
DNA (714bp) protein (238aa)
DNA polymerase III subunit epsilon n=1 Tax=Acidovorax sp. KKS102 RepID=K0I130_9BURK rbh
DNA polymerase III subunit epsilon rbh
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:AFU45970.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2209_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15200..15538)
DNA (339bp) protein (113aa)
Ferredoxin, 2Fe-2S type, ISC system n=1 Tax=Acidovorax sp. KKS102 RepID=K0I498_9BURK
ferredoxin, 2Fe-2S type, ISC system
Ferredoxin, 2Fe-2S type, ISC system {ECO:0000313|EMBL:AFU45969.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2209_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15580..17145)
DNA (1566bp) protein (522aa)
Chaperone protein HscA homolog n=1 Tax=Acidovorax sp. KKS102 RepID=K0HSM7_9BURK rbh
hscA; chaperone protein HscA rbh
Chaperone protein HscA homolog {ECO:0000256|HAMAP-Rule:MF_00679}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2209_19
Thauera aminoaromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17183..17815
DNA (633bp) protein (211aa)
NAD-specific glutamate dehydrogenase n=1 Tax=Thauera aminoaromatica S2 RepID=N6YW23_9RHOO
NAD-specific glutamate dehydrogenase {ECO:0000313|EMBL:ENO84159.1}; TaxID=1234381 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera aminoaromatica S2.;"
SCNpilot_expt_1000_bf_scaffold_2209_20
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18232..18555)
DNA (324bp) protein (108aa)
Iron-sulfur cluster assembly protein IscA n=1 Tax=Acidovorax sp. KKS102 RepID=K0IA19_9BURK
iron-sulfur cluster assembly protein IscA
Iron-sulfur cluster assembly protein IscA {ECO:0000313|EMBL:AFU45966.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2209_21
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18705..18965)
DNA (261bp) protein (87aa)
FeS cluster assembly scaffold IscU n=1 Tax=Acidovorax sp. KKS102 RepID=K0I126_9BURK
FeS cluster assembly scaffold IscU
FeS cluster assembly scaffold IscU {ECO:0000313|EMBL:AFU45965.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2209_22
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19005..20225)
DNA (1221bp) protein (407aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Cysteine desulfurase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I493_9BURK rbh
cysteine desulfurase IscS rbh
SCNpilot_expt_1000_bf_scaffold_2209_23
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20341..20877)
DNA (537bp) protein (179aa)
BadM/Rrf2 family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0HSM0_9BURK rbh
BadM/Rrf2 family transcriptional regulator rbh
BadM/Rrf2 family transcriptional regulator {ECO:0000313|EMBL:AFU45963.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2209_24
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21131..22417)
DNA (1287bp) protein (429aa)
UvrABC system protein B n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYI2_9BURK
excinuclease ABC subunit B
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2209_25
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22414..23187)
DNA (774bp) protein (258aa)
UvrABC system protein B n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYI2_9BURK
excinuclease ABC subunit B
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2209_26
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23294..24463
DNA (1170bp) protein (390aa)
aromatic amino acid aminotransferase (EC:2.6.1.57) rbh
Aromatic amino acid aminotransferase {ECO:0000313|EMBL:AFU45961.1}; EC=2.6.1.57 {ECO:0000313|EMBL:AFU45961.1};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Aromatic amino acid aminotransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IA15_9BURK rbh
SCNpilot_expt_1000_bf_scaffold_2209_27
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24402..24872
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I121_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU45960.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying 27 items

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