ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2299

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2299_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151..1032)
DNA (882bp) protein (294aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICB4_9BURK rbh
LysR family transcriptional regulator rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:AFU46956.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2299_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1160..1858
DNA (699bp) protein (233aa)
Methyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I383_9BURK rbh
methyltransferase rbh
Methyltransferase {ECO:0000313|EMBL:AFU46955.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2299_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2075..2500
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6V4_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46954.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2299_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2560..3360
DNA (801bp) protein (267aa)
Alpha/beta hydrolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVM8_9BURK rbh
alpha/beta hydrolase rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:AFU46953.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2299_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3432..4319
DNA (888bp) protein (296aa)
Alpha/beta hydrolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1X9_9BURK rbh
alpha/beta hydrolase rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:AFU46952.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2299_6
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4678..5742)
DNA (1065bp) protein (355aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82S49_NITEU rbh
NADH:flavin oxidoreductase rbh
NADH:flavin oxidoreductase {ECO:0000313|EMBL:KGH07281.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
SCNpilot_expt_1000_bf_scaffold_2299_7
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5959..6921)
DNA (963bp) protein (321aa)
AraC family transcriptional regulator n=1 Tax=Comamonas sp. B-9 RepID=UPI000395DEBC rbh
AraC family transcription regulator {ECO:0000313|EMBL:EHL21593.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
AraC family transcription regulator rbh
SCNpilot_expt_1000_bf_scaffold_2299_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7502..8143
DNA (642bp) protein (214aa)
Putative TIS1421-transposase orfA protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVL9_9BURK
TIS1421-transposase orfA protein
Putative TIS1421-transposase orfA protein {ECO:0000313|EMBL:AFU46948.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2299_9
unknown

Not on your lists

8212..8307
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2299_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8455..9333
DNA (879bp) protein (293aa)
Helix-turn-helix domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1X4_9BURK rbh
helix-turn-helix domain-containing protein rbh
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:AFU46947.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2299_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9770..12484
DNA (2715bp) protein (905aa)
Molybdopterin binding aldehyde oxidase and xanthine dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICA3_9BURK rbh
Molybdopterin binding aldehyde oxidase and xanthine dehydrogenase {ECO:0000313|EMBL:AFU46946.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase rbh
SCNpilot_expt_1000_bf_scaffold_2299_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12481..13296
DNA (816bp) protein (272aa)
Carbon monoxide dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I375_9BURK rbh
carbon monoxide dehydrogenase rbh
Carbon monoxide dehydrogenase {ECO:0000313|EMBL:AFU46945.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2299_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13293..13796
DNA (504bp) protein (168aa)
(2Fe-2S)-binding domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6U0_9BURK rbh
(2Fe-2S)-binding domain-containing protein rbh
(2Fe-2S)-binding domain-containing protein {ECO:0000313|EMBL:AFU46944.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2299_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13789..15336
DNA (1548bp) protein (516aa)
Long-chain-fatty acid CoA ligase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVL4_9BURK rbh
long-chain-fatty acid CoA ligase rbh
Long-chain-fatty acid CoA ligase {ECO:0000313|EMBL:AFU46943.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2299_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15397..16209
DNA (813bp) protein (271aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1W9_9BURK rbh
enoyl-CoA hydratase/isomerase rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AFU46942.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2299_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16278..17447
DNA (1170bp) protein (390aa)
Extracellular ligand-binding receptor n=1 Tax=Acidovorax sp. KKS102 RepID=K0IC97_9BURK rbh
extracellular ligand-binding receptor rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:AFU46941.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2299_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18566..19399
DNA (834bp) protein (278aa)
Inner-membrane translocator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6T4_9BURK rbh
inner-membrane translocator rbh
Inner-membrane translocator {ECO:0000313|EMBL:AFU46939.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2299_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19399..20148
DNA (750bp) protein (250aa)
ABC transporter n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVK8_9BURK rbh
ABC transporter rbh
ABC transporter {ECO:0000313|EMBL:AFU46938.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2299_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20148..20852
DNA (705bp) protein (235aa)
ABC transporter-like protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1W3_9BURK rbh
ABC transporter-like protein rbh
ABC transporter-like protein {ECO:0000313|EMBL:AFU46937.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2299_20
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20916..23402)
DNA (2487bp) protein (829aa)
Putative ATP-dependent protease La n=1 Tax=Acidovorax sp. KKS102 RepID=K0IC94_9BURK rbh
Putative ATP-dependent protease La {ECO:0000313|EMBL:AFU46936.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
ATP-dependent protease La rbh
SCNpilot_expt_1000_bf_scaffold_2299_21
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23644..24753)
DNA (1110bp) protein (370aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Ferrochelatase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I369_9BURK rbh
ferrochelatase rbh
SCNpilot_expt_1000_bf_scaffold_2299_22
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24956..25591
DNA (636bp) protein (212aa)
Polar amino acid ABC transporter inner membrane subunit n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6T0_9BURK
polar amino acid ABC transporter inner membrane subunit
Polar amino acid ABC transporter inner membrane subunit {ECO:0000313|EMBL:AFU46934.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2299_23
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25603..26256
DNA (654bp) protein (218aa)
Polar amino acid ABC transporter inner membrane subunit n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVK3_9BURK rbh
polar amino acid ABC transporter inner membrane subunit rbh
Polar amino acid ABC transporter inner membrane subunit {ECO:0000313|EMBL:AFU46933.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2299_24
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26322..27128
DNA (807bp) protein (269aa)
Family 3 extracellular solute-binding protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1U6_9BURK rbh
family 3 extracellular solute-binding protein rbh
Family 3 extracellular solute-binding protein {ECO:0000313|EMBL:AFU46932.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2299_25
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27156..27935
DNA (780bp) protein (260aa)
ABC transporter n=1 Tax=Acidovorax sp. KKS102 RepID=K0IC88_9BURK rbh
ABC transporter rbh
ABC transporter {ECO:0000313|EMBL:AFU46931.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2299_26
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27997..28743
DNA (747bp) protein (249aa)
Xylose isomerase domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I365_9BURK rbh
xylose isomerase domain-containing protein rbh
Xylose isomerase domain-containing protein {ECO:0000313|EMBL:AFU46930.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2299_27
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28740..29690
DNA (951bp) protein (317aa)
Pfkb domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6S5_9BURK rbh
pfkb domain-containing protein rbh
Pfkb domain-containing protein {ECO:0000313|EMBL:AFU46929.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2299_28
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29687..31762
DNA (2076bp) protein (692aa)
LacI family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1U2_9BURK rbh
LacI family transcriptional regulator rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:AFU46927.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2299_29
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32027..32734
DNA (708bp) protein (236aa)
HAD family hydrolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IC84_9BURK rbh
HAD family hydrolase rbh
HAD family hydrolase {ECO:0000313|EMBL:AFU46926.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2299_30
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32895..33710
DNA (816bp) protein (272aa)
Integral membrane protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I361_9BURK rbh
integral membrane protein rbh
Integral membrane protein {ECO:0000313|EMBL:AFU46925.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying items 1-30 of 43 in total

View Taxonomy