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SCNpilot_expt_1000_bf_scaffold_2339

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2339_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85..1701)
DNA (1617bp) protein (539aa)
Transcriptional regulatory protein RtcR n=1 Tax=Acidovorax sp. KKS102 RepID=K0HN57_9BURK rbh
transcriptional regulatory protein RtcR rbh
Transcriptional regulatory protein RtcR {ECO:0000313|EMBL:AFU44443.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2339_2
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2426..3571
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI000237588D rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_expt_1000_bf_scaffold_2339_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3849..4682
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUM3_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU44442.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2339_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5145..5948
DNA (804bp) protein (268aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
RNA-splicing ligase RtcB n=1 Tax=Acidovorax sp. KKS102 RepID=K0I693_9BURK
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2339_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6817..7227
DNA (411bp) protein (137aa)
Nucleotidyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HX93_9BURK
nucleotidyltransferase
Nucleotidyltransferase {ECO:0000313|EMBL:AFU44440.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2339_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7224..8297
DNA (1074bp) protein (358aa)
RNA 3'-terminal phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; EC=6.5.1.4 {ECO:0000256|HAMAP-Rule:MF_00200};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
RNA 3'-phosphate cyclase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZY4_9BURK rbh
RNA 3'-phosphate cyclase rbh
SCNpilot_expt_1000_bf_scaffold_2339_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8427..9344
DNA (918bp) protein (306aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Cysteine synthase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HN50_9BURK rbh
cysteine synthase rbh
SCNpilot_expt_1000_bf_scaffold_2339_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9535..10308
DNA (774bp) protein (258aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUL8_9BURK rbh
endonuclease/exonuclease/phosphatase rbh
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:AFU44437.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2339_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10305..11555
DNA (1251bp) protein (417aa)
Cardiolipin synthase B {ECO:0000256|HAMAP-Rule:MF_01917}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01917};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01917};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Cardiolipin synthase 2 n=1 Tax=Acidovorax sp. KKS102 RepID=K0I687_9BURK rbh
cardiolipin synthase 2 rbh
SCNpilot_expt_1000_bf_scaffold_2339_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11573..12589
DNA (1017bp) protein (339aa)
Lysylphosphatidylglycerol synthetase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HX84_9BURK rbh
lysylphosphatidylglycerol synthetase rbh
Lysylphosphatidylglycerol synthetase {ECO:0000313|EMBL:AFU44435.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2339_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12792..14510
DNA (1719bp) protein (573aa)
FAD dependent oxidoreductase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZW8_9BURK rbh
FAD dependent oxidoreductase rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:AFU44434.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2339_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14785..15048
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HN44_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44433.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2339_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15079..16422)
DNA (1344bp) protein (448aa)
Amidohydrolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUL3_9BURK rbh
amidohydrolase rbh
Amidohydrolase {ECO:0000313|EMBL:AFU44432.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2339_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16520..17614
DNA (1095bp) protein (365aa)
AraC family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I681_9BURK rbh
araC family transcriptional regulator rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:AFU44431.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2339_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17788..19308
DNA (1521bp) protein (507aa)
Anion transporter n=1 Tax=Acidovorax sp. KKS102 RepID=K0HX76_9BURK rbh
anion transporter rbh
Anion transporter {ECO:0000313|EMBL:AFU44430.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2339_16
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19318..19980)
DNA (663bp) protein (221aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZV9_9BURK
methyl-accepting chemotaxis sensory transducer
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_2339_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21069..21950)
DNA (882bp) protein (294aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Protease HtpX homolog n=1 Tax=Acidovorax sp. KKS102 RepID=K0HN39_9BURK
heat shock protein HtpX
SCNpilot_expt_1000_bf_scaffold_2339_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22134..22874)
DNA (741bp) protein (247aa)
Putative transmembrane protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUK9_9BURK rbh
transmembrane protein rbh
Putative transmembrane protein {ECO:0000313|EMBL:AFU44427.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2339_19
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22861..24018)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5Q5_ACIDE rbh
Uncharacterized protein {ECO:0000313|EMBL:EER60198.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2339_20
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24015..25058)
DNA (1044bp) protein (348aa)
dihydroorotase (EC:3.5.2.3) rbh
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU003440}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00219};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU003440};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Dihydroorotase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I671_9BURK rbh
SCNpilot_expt_1000_bf_scaffold_2339_21
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25189..26151)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HX69_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU44425.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2339_22
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26217..27398)
DNA (1182bp) protein (394aa)
Peptidase dimerization domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZU7_9BURK rbh
peptidase dimerization domain-containing protein rbh
Peptidase dimerization domain-containing protein {ECO:0000313|EMBL:AFU44424.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2339_23
Nematostella vectensis, Nematostella, Actiniaria, Hexacorallia, Cnidaria, Metazoa

Not on your lists

comp(27834..28433)
DNA (600bp) protein (200aa)
Predicted protein n=1 Tax=Nematostella vectensis RepID=A7T408_NEMVE
hypothetical protein
Predicted protein {ECO:0000313|EMBL:EDO29305.1}; TaxID=45351 species="Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella.;" source="Nematostella vectensis (Starlet sea anemone).;"
SCNpilot_expt_1000_bf_scaffold_2339_24
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28503..29240)
DNA (738bp) protein (246aa)
ABC transporter-like protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUK4_9BURK rbh
ABC transporter-like protein rbh
ABC transporter-like protein {ECO:0000313|EMBL:AFU44422.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2339_25
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29281..29946)
DNA (666bp) protein (222aa)
Polar amino acid ABC transporter permease n=1 Tax=Acidovorax sp. KKS102 RepID=K0I667_9BURK rbh
polar amino acid ABC transporter permease rbh
Polar amino acid ABC transporter permease {ECO:0000313|EMBL:AFU44421.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying 25 items

View Taxonomy