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SCNpilot_expt_1000_bf_scaffold_2408

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2408_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..674
DNA (672bp) protein (224aa)
Cytochrome o ubiquinol oxidase subunit III n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICR3_9BURK rbh
cytochrome o ubiquinol oxidase subunit III rbh
Cytochrome o ubiquinol oxidase subunit III {ECO:0000313|EMBL:AFU47066.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

675..1106
DNA (432bp) protein (144aa)
Cytochrome o ubiquinol oxidase subunit IV n=1 Tax=Acidovorax sp. KKS102 RepID=K0I288_9BURK
cytochrome o ubiquinol oxidase subunit IV
Cytochrome o ubiquinol oxidase subunit IV {ECO:0000313|EMBL:AFU47067.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1106..1924
DNA (819bp) protein (273aa)
Surfeit locus 1 family protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW22_9BURK rbh
surfeit locus 1 family protein rbh
Surfeit locus 1 family protein {ECO:0000313|EMBL:AFU47068.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1899..3230
DNA (1332bp) protein (444aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I782_9BURK rbh
integral membrane sensor signal transduction histidine kinase rbh
SCNpilot_expt_1000_bf_scaffold_2408_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3250..4050
DNA (801bp) protein (267aa)
Two component Fis family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3I0_9BURK
two component Fis family transcriptional regulator
Two component Fis family transcriptional regulator {ECO:0000313|EMBL:AFU47070.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3884..4873)
DNA (990bp) protein (330aa)
Putative transporter n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICR7_9BURK rbh
transporter rbh
Putative transporter {ECO:0000313|EMBL:AFU47071.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5142..7400)
DNA (2259bp) protein (753aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW26_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU47073.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7391..7570)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW26_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47073.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7701..10292)
DNA (2592bp) protein (864aa)
bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase (EC:4.2.1.3) rbh
Aconitate hydratase B {ECO:0000256|PIRNR:PIRNR036687}; EC=4.2.1.3 {ECO:0000256|PIRNR:PIRNR036687};; EC=4.2.1.99 {ECO:0000256|PIRNR:PIRNR036687};; 2-methylisocitrate dehydratase {ECO:0000256|PIRNR:PIRNR036687}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Aconitate hydratase 2 n=1 Tax=Acidovorax sp. KKS102 RepID=K0I785_9BURK rbh
SCNpilot_expt_1000_bf_scaffold_2408_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10382..11017)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3I4_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU47075.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11050..12117)
DNA (1068bp) protein (356aa)
HpcH/HpaI aldolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICR9_9BURK rbh
HpcH/HpaI aldolase rbh
HpcH/HpaI aldolase {ECO:0000313|EMBL:AFU47076.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12138..12761)
DNA (624bp) protein (208aa)
malate dehydrogenase (EC:1.1.1.37)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Malate dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I294_9BURK
SCNpilot_expt_1000_bf_scaffold_2408_13
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12895..13137
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:EWS63337.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
SCNpilot_expt_1000_bf_scaffold_2408_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13352..14140
DNA (789bp) protein (263aa)
GntR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW30_9BURK rbh
GntR family transcriptional regulator rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:AFU47078.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14274..14708
DNA (435bp) protein (145aa)
Succinate dehydrogenase subunit C n=1 Tax=Acidovorax sp. KKS102 RepID=K0I789_9BURK
succinate dehydrogenase subunit C
Succinate dehydrogenase subunit C {ECO:0000313|EMBL:AFU47079.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14772..15137
DNA (366bp) protein (122aa)
Succinate dehydrogenase subunit D n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3I8_9BURK
succinate dehydrogenase subunit D
Succinate dehydrogenase subunit D {ECO:0000313|EMBL:AFU47080.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15160..16968
DNA (1809bp) protein (603aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Succinate dehydrogenase flavoprotein subunit n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICS3_9BURK rbh
succinate dehydrogenase flavoprotein subunit rbh
SCNpilot_expt_1000_bf_scaffold_2408_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16991..17695
DNA (705bp) protein (235aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Succinate dehydrogenase subunit B n=1 Tax=Acidovorax sp. KKS102 RepID=K0I299_9BURK rbh
succinate dehydrogenase subunit B rbh
SCNpilot_expt_1000_bf_scaffold_2408_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17729..18055
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW34_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47083.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_20
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18115..19326
DNA (1212bp) protein (404aa)
gltA; type II citrate synthase (EC:2.3.3.1)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Citrate synthase n=2 Tax=Acidovorax RepID=K0I790_9BURK
SCNpilot_expt_1000_bf_scaffold_2408_21
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19641..19907
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C149_9BURK
Regulator {ECO:0000313|EMBL:KJA10837.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2408_22
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19965..20159
DNA (195bp) protein (65aa)
S-(hydroxymethyl)glutathione dehydrogenase (EC:1.1.1.284)
S-(hydroxymethyl)glutathione dehydrogenase n=1 Tax=Acidovorax radicis RepID=UPI0002375840
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_2408_23
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20850..21101
DNA (252bp) protein (84aa)
S-(hydroxymethyl)glutathione dehydrogenase (EC:1.1.1.284)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
S-(Hydroxymethyl)glutathione dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3J8_9BURK
SCNpilot_expt_1000_bf_scaffold_2408_24
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21275..22147
DNA (873bp) protein (291aa)
S-formylglutathione hydrolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICT0_9BURK rbh
s-formylglutathione hydrolase rbh
S-formylglutathione hydrolase {ECO:0000313|EMBL:AFU47091.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_25
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22507..23895
DNA (1389bp) protein (463aa)
Sulfatase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I2A6_9BURK rbh
sulfatase rbh
Sulfatase {ECO:0000313|EMBL:AFU47092.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_26
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23945..24616)
DNA (672bp) protein (224aa)
PIG3 family NAD(P)H quinone oxidoreductase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW42_9BURK rbh
PIG3 family NAD(P)H quinone oxidoreductase rbh
PIG3 family NAD(P)H quinone oxidoreductase {ECO:0000313|EMBL:AFU47093.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_27
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25118..25987
DNA (870bp) protein (290aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I796_9BURK rbh
LysR family transcriptional regulator rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:AFU47094.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_28
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26102..26389
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3K0_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47095.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_29
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26488..27741)
DNA (1254bp) protein (418aa)
radical SAM protein n=1 Tax=Acidovorax radicis RepID=UPI00023754D6 rbh
Radical SAM protein {ECO:0000313|EMBL:KJA10858.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
radical SAM domain-containing protein rbh
SCNpilot_expt_1000_bf_scaffold_2408_30
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27946..29148
DNA (1203bp) protein (401aa)
Rh family protein/ammonium transporter n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7C4_9BURK rbh
Rh family protein/ammonium transporter rbh
Rh family protein/ammonium transporter {ECO:0000313|EMBL:AFU47124.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying items 1-30 of 45 in total

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