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SCNpilot_expt_1000_bf_scaffold_2414

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2414_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1060
DNA (1059bp) protein (353aa)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) {ECO:0000256|RuleBase:RU362045}; EC=2.4.1.15 {ECO:0000256|RuleBase:RU362045};; Osmoregulatory trehalose synthesis protein A {ECO:0000256|RuleBase:RU362045}; Trehalose-6-phosphate synthase {ECO:0000256|RuleBase:RU362045}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Alpha,alpha-trehalose-phosphate synthase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IEW3_9BURK
alpha,alpha-trehalose-phosphate synthase
SCNpilot_expt_1000_bf_scaffold_2414_2
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1096..1290)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI00023769EC
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_2414_3
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1312..2430)
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI00023769F5 rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_2414_4
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2441..3235
DNA (795bp) protein (265aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4D5_9BURK rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EHL20492.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_expt_1000_bf_scaffold_2414_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3271..3654
DNA (384bp) protein (128aa)
Dihydroneopterin aldolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5S8_9BURK
dihydroneopterin aldolase
Dihydroneopterin aldolase {ECO:0000313|EMBL:AFU47930.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2414_6
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3659..4225
DNA (567bp) protein (189aa)
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4D3_9BURK
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
PP-loop domain-containing protein
SCNpilot_expt_1000_bf_scaffold_2414_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4222..4623
DNA (402bp) protein (134aa)
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5V3_9BURK
PP-loop domain-containing protein
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2414_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4825..5316
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IEY9_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU47951.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2414_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5348..5989
DNA (642bp) protein (214aa)
Phosphoglycerate mutase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I440_9BURK rbh
phosphoglycerate mutase rbh
Phosphoglycerate mutase {ECO:0000313|EMBL:AFU47952.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2414_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5973..7142
DNA (1170bp) protein (390aa)
Alanine racemase domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HY23_9BURK rbh
alanine racemase domain-containing protein rbh
Alanine racemase domain-containing protein {ECO:0000313|EMBL:AFU47953.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2414_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7222..9024
DNA (1803bp) protein (601aa)
Yhhn family protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I9M3_9BURK rbh
Yhhn family protein {ECO:0000313|EMBL:AFU47954.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
yhhn family protein rbh
SCNpilot_expt_1000_bf_scaffold_2414_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8981..10042)
DNA (1062bp) protein (354aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.6.1.-) rbh
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5V9_9BURK rbh
SCNpilot_expt_1000_bf_scaffold_2414_13
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10073..11986)
DNA (1914bp) protein (638aa)
Putative uncharacterized protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TUZ0_ACIAC rbh
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:KJA11928.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2414_14
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12080..12655)
DNA (576bp) protein (192aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4C4_9BURK rbh
ruvA; Holliday junction ATP-dependent DNA helicase RuvA rbh
SCNpilot_expt_1000_bf_scaffold_2414_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12736..13692
DNA (957bp) protein (319aa)
PhoH family protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I9M7_9BURK rbh
PhoH family protein rbh
PhoH family protein {ECO:0000313|EMBL:AFU47959.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2414_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13755..14213
DNA (459bp) protein (153aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Endoribonuclease YbeY n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5W6_9BURK
metal-dependent hydrolase
SCNpilot_expt_1000_bf_scaffold_2414_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14393..16411
DNA (2019bp) protein (673aa)
Major facilitator superfamily protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I450_9BURK rbh
major facilitator superfamily protein rbh
Major facilitator superfamily protein {ECO:0000313|EMBL:AFU47962.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2414_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16608..17054)
DNA (447bp) protein (149aa)
Universal stress protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HY32_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47963.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2414_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17128..17586)
DNA (459bp) protein (153aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I9N4_9BURK
D-tyrosyl-tRNA(Tyr) deacylase
SCNpilot_expt_1000_bf_scaffold_2414_20
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17583..18533)
DNA (951bp) protein (317aa)
Cation diffusion facilitator family transporter n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4B8_9BURK rbh
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EHL20475.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
cation diffusion facilitator family transporter rbh
SCNpilot_expt_1000_bf_scaffold_2414_21
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18946..20490
DNA (1545bp) protein (515aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Periplasmic sensor signal transduction n=1 Tax=Acidovorax sp. KKS102 RepID=K0IF04_9BURK rbh
periplasmic sensor signal transduction rbh
SCNpilot_expt_1000_bf_scaffold_2414_22
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20480..21112
DNA (633bp) protein (211aa)
Two component transcriptional regulator LuxR n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4B6_9BURK rbh
Two component transcriptional regulator LuxR {ECO:0000313|EMBL:EHL20473.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
two component transcriptional regulator LuxR rbh
SCNpilot_expt_1000_bf_scaffold_2414_23
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21251..21745
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4B5_9BURK rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHL20472.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2414_24
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21789..22481
DNA (693bp) protein (231aa)
Ankyrin n=1 Tax=Acidovorax sp. KKS102 RepID=K0I9N9_9BURK rbh
ankyrin rbh
Ankyrin {ECO:0000313|EMBL:AFU47969.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2414_25
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22559..24004)
DNA (1446bp) protein (482aa)
ATP-dependent RNA helicase DbpA n=1 Tax=Acidovorax sp. KKS102 RepID=K0HY42_9BURK rbh
ATP-dependent RNA helicase DbpA rbh
ATP-dependent RNA helicase DbpA {ECO:0000313|EMBL:AFU47978.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2414_26
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24011..24787)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I9P9_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU47979.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2414_27
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24739..25188)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I9P9_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47979.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying 27 items

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