ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1089

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1089_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..569)
DNA (567bp) protein (189aa)
Phosphate transporter n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZ65_9BURK
phosphate transporter
Phosphate transporter {ECO:0000313|EMBL:AFU45060.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1089_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(589..972)
DNA (384bp) protein (128aa)
Phosphate transport regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1P2_9BURK
phosphate transport regulator
Phosphate transport regulator {ECO:0000313|EMBL:AFU45059.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1089_3
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(951..1247)
DNA (297bp) protein (99aa)
Phosphate transport regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1P2_9BURK
phosphate transport regulator
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_1089_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1435..1797)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HPY2_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU45058.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1089_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2006..2734)
DNA (729bp) protein (243aa)
ABC transporter-like protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW35_9BURK rbh
ABC transporter-like protein rbh
ABC transporter-like protein {ECO:0000313|EMBL:AFU45057.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1089_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2737..3519)
DNA (783bp) protein (261aa)
Monosaccharide-transporting ATPase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7X9_9BURK rbh
monosaccharide-transporting ATPase rbh
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:AFU45056.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1089_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3545..4621)
DNA (1077bp) protein (359aa)
Inner-membrane translocator n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZ62_9BURK rbh
inner-membrane translocator rbh
Inner-membrane translocator {ECO:0000313|EMBL:AFU45055.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1089_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4635..5564)
DNA (930bp) protein (310aa)
Inner-membrane translocator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1N9_9BURK rbh
inner-membrane translocator rbh
Inner-membrane translocator {ECO:0000313|EMBL:AFU45054.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1089_9
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5925..7265)
DNA (1341bp) protein (447aa)
ATPase AAA n=1 Tax=Acidovorax radicis RepID=UPI00023758B5 rbh
recombination factor protein RarA rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_expt_1000_bf_scaffold_1089_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7360..7908)
DNA (549bp) protein (183aa)
Outer-membrane lipoprotein carrier protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1N6_9BURK rbh
outer membrane lipoprotein carrier protein LolA rbh
Outer-membrane lipoprotein carrier protein {ECO:0000256|HAMAP-Rule:MF_00240, ECO:0000256|SAAS:SAAS00028972}; Flags: Precursor;; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1089_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7985..10351)
DNA (2367bp) protein (789aa)
Cell division protein FtsK/SpoIIIE n=1 Tax=Acidovorax sp. KKS102 RepID=K0HPX2_9BURK rbh
Cell division protein FtsK/SpoIIIE {ECO:0000313|EMBL:AFU45048.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
cell division protein FtsK rbh
SCNpilot_expt_1000_bf_scaffold_1089_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10395..11072)
DNA (678bp) protein (226aa)
CRP family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW29_9BURK rbh
CRP family transcriptional regulator rbh
CRP family transcriptional regulator {ECO:0000313|EMBL:AFU45047.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1089_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11260..12213
DNA (954bp) protein (318aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Thioredoxin reductase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7X4_9BURK rbh
thioredoxin reductase rbh
SCNpilot_expt_1000_bf_scaffold_1089_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12483..12716
DNA (234bp) protein (78aa)
50S ribosomal protein L28 n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZ57_9BURK
rpmB; 50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1089_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12728..12913
DNA (186bp) protein (62aa)
50S ribosomal protein L33 n=2 Tax=Acidovorax RepID=K0I1N5_9BURK
rpmG; 50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1089_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13148..14362)
DNA (1215bp) protein (405aa)
Fatty acid desaturase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HPW8_9BURK rbh
fatty acid desaturase rbh
Fatty acid desaturase {ECO:0000313|EMBL:AFU45043.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1089_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14494..15768)
DNA (1275bp) protein (425aa)
Fmu (Sun) domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW23_9BURK rbh
Fmu (Sun) domain-containing protein rbh
Fmu (Sun) domain-containing protein {ECO:0000313|EMBL:AFU45042.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1089_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15872..17146)
DNA (1275bp) protein (425aa)
Peptidase M48, Ste24p n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7X2_9BURK rbh
peptidase M48, Ste24p rbh
Peptidase M48, Ste24p {ECO:0000313|EMBL:AFU45041.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1089_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17118..17708)
DNA (591bp) protein (197aa)
Peptidase M48, Ste24p n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7X2_9BURK
peptidase M48, Ste24p
Peptidase M48, Ste24p {ECO:0000313|EMBL:AFU45041.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1089_20
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17776..18030
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZ55_9BURK
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_1089_21
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18050..19093)
DNA (1044bp) protein (348aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q973_ACIAP rbh
integral membrane sensor signal transduction histidine kinase rbh
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_1089_22
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19093..19821)
DNA (729bp) protein (243aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q974_ACIAP rbh
winged helix family two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_1089_23
unknown

Not on your lists

comp(19910..20644)
DNA (735bp) protein (245aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1089_24
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20764..21027
DNA (264bp) protein (88aa)
EF-Hand, calmodulin n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q975_ACIAP
EF-Hand, calmodulin
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_expt_1000_bf_scaffold_1089_25
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21276..21491)
DNA (216bp) protein (72aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Phosphoribosylglycinamide formyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1N1_9BURK
SCNpilot_expt_1000_bf_scaffold_1089_26
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21541..22605
DNA (1065bp) protein (355aa)
UPF0502 protein C380_06640 n=1 Tax=Acidovorax sp. KKS102 RepID=K0HPW2_9BURK rbh
hypothetical protein rbh
UPF0502 protein C380_06640 {ECO:0000256|HAMAP-Rule:MF_01584}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1089_27
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22651..23355
DNA (705bp) protein (235aa)
Isovaleryl-CoA dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW19_9BURK
isovaleryl-CoA dehydrogenase
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:AFU45037.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1089_28
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23382..23813
DNA (432bp) protein (144aa)
Isovaleryl-CoA dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW19_9BURK
isovaleryl-CoA dehydrogenase
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:EHL22498.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
SCNpilot_expt_1000_bf_scaffold_1089_29
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23838..24953
DNA (1116bp) protein (372aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7W9_9BURK rbh
acyl-CoA dehydrogenase domain-containing protein rbh
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:AFU45036.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1089_30
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25042..26436
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZ50_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU45035.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying items 1-30 of 46 in total

View Taxonomy