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SCNpilot_expt_1000_bf_scaffold_3072

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3072_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..338
DNA (336bp) protein (112aa)
Unusual protein kinase-like protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I684_9BURK
unusual protein kinase-like protein
Unusual protein kinase-like protein {ECO:0000313|EMBL:AFU48035.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3072_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

335..736
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IFC9_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU48036.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3072_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1538..1984
DNA (447bp) protein (149aa)
Putative signal peptide protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HY94_9BURK
signal peptide protein
Putative signal peptide protein {ECO:0000313|EMBL:AFU48038.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3072_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2027..2317)
DNA (291bp) protein (97aa)
2-keto-4-pentenoate hydratase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I9X5_9BURK
2-keto-4-pentenoate hydratase
2-keto-4-pentenoate hydratase {ECO:0000313|EMBL:AFU48039.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3072_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2320..2778)
DNA (459bp) protein (153aa)
2-keto-4-pentenoate hydratase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I9X5_9BURK
2-keto-4-pentenoate hydratase
2-keto-4-pentenoate hydratase {ECO:0000313|EMBL:AFU48039.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3072_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3215..4531
DNA (1317bp) protein (439aa)
D-amino-acid dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I689_9BURK rbh
D-amino-acid dehydrogenase rbh
D-amino-acid dehydrogenase {ECO:0000313|EMBL:AFU48040.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3072_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4595..4933)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IFD4_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU48041.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3072_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4935..6149)
DNA (1215bp) protein (405aa)
Sulfite dehydrogenase (Cytochrome) subunit SorA apoprotein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4F5_9BURK rbh
sulfite dehydrogenase (cytochrome) subunit SorA apoprotein rbh
Sulfite dehydrogenase (Cytochrome) subunit SorA apoprotein {ECO:0000313|EMBL:AFU48042.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3072_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6370..7545
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HY97_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU48043.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3072_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7627..8952
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I9X7_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU48044.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3072_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9008..10342)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I690_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU48045.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3072_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10422..11048)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IFD8_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU48046.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3072_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11399..11884)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4F7_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU48047.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3072_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11952..12512)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HY99_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU48048.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3072_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12527..13207)
DNA (681bp) protein (227aa)
TonB-dependent receptor protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I9Y1_9BURK
TonB-dependent receptor protein
TonB-dependent receptor protein {ECO:0000313|EMBL:AFU48049.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3072_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13191..14831)
DNA (1641bp) protein (547aa)
TonB-dependent receptor protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I9Y1_9BURK
TonB-dependent receptor protein
TonB-dependent receptor protein {ECO:0000313|EMBL:AFU48049.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3072_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14912..15283)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I695_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU48050.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3072_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15407..16054
DNA (648bp) protein (216aa)
Glutathione S-transferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IFE3_9BURK rbh
glutathione S-transferase rbh
Glutathione S-transferase {ECO:0000313|EMBL:AFU48051.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3072_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16178..16549
DNA (372bp) protein (124aa)
TraR/DksA family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4G0_9BURK
TraR/DksA family transcriptional regulator
TraR/DksA family transcriptional regulator {ECO:0000313|EMBL:AFU48052.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3072_20
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16612..16986
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYA1_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU48053.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3072_21
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17039..17455
DNA (417bp) protein (139aa)
dioxygenase n=1 Tax=Acidovorax radicis RepID=UPI000237836C
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_3072_22
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17452..18045
DNA (594bp) protein (198aa)
Multiple antibiotic resistance (Marc)-related protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I698_9BURK rbh
multiple antibiotic resistance (marc)-like protein rbh
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3072_23
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18142..18690)
DNA (549bp) protein (183aa)
BadM/Rrf2 family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0IFE8_9BURK rbh
BadM/Rrf2 family transcriptional regulator rbh
BadM/Rrf2 family transcriptional regulator {ECO:0000313|EMBL:AFU48056.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3072_24
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18842..19738
DNA (897bp) protein (299aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4G2_9BURK rbh
LysR family transcriptional regulator rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:AFU48057.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3072_25
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20004..20396)
DNA (393bp) protein (131aa)
50S ribosomal protein L17 n=2 Tax=Acidovorax RepID=K0HYA4_9BURK
ribosomal protein l17
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_3072_26
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20551..21543)
DNA (993bp) protein (331aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) rbh
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
DNA-directed RNA polymerase subunit alpha n=3 Tax=Bacteria RepID=K0I9Y7_9BURK rbh
SCNpilot_expt_1000_bf_scaffold_3072_27
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(21656..21997)
DNA (342bp) protein (114aa)
30S ribosomal protein S4 n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002E105FC
30S ribosomal protein S4-like
30S ribosomal protein S4 {ECO:0000255|HAMAP-Rule:MF_01306}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Displaying 27 items

View Taxonomy