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SCNpilot_expt_1000_bf_scaffold_3164

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3164_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1956
DNA (1956bp) protein (652aa)
Aminopeptidase N n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5J0_9BURK
pepN; aminopeptidase N
Aminopeptidase N {ECO:0000313|EMBL:AFU46474.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3164_2
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2503..2973
DNA (471bp) protein (157aa)
fructose-1,6-bisphosphatase (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
Fructose-1,6-bisphosphatase class 1 n=1 Tax=Acidovorax sp. NO-1 RepID=H0C2Y1_9BURK
SCNpilot_expt_1000_bf_scaffold_3164_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3260..3616
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUE2_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46533.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3164_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3696..4004)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5R2_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46534.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3164_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4354..4788)
DNA (435bp) protein (145aa)
MerR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I2G2_9BURK
MerR family transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:AFU46535.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3164_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4886..5212)
DNA (327bp) protein (109aa)
Integration host factor subunit alpha n=1 Tax=Acidovorax sp. KKS102 RepID=K0IB89_9BURK
ihfA; integration host factor subunit alpha
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3164_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5238..5621)
DNA (384bp) protein (128aa)
pheT; phenylalanyl-tRNA ligase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0N1_9BURK
SCNpilot_expt_1000_bf_scaffold_3164_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5621..7678)
DNA (2058bp) protein (686aa)
pheT; phenylalanyl-tRNA ligase subunit beta (EC:6.1.1.20) rbh
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0N1_9BURK rbh
SCNpilot_expt_1000_bf_scaffold_3164_9
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7750..8802)
DNA (1053bp) protein (351aa)
pheS; phenylalanyl-tRNA ligase subunit alpha (EC:6.1.1.20) rbh
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Acidovorax sp. NO-1 RepID=H0BVD1_9BURK rbh
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_3164_10
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9010..9204)
DNA (195bp) protein (65aa)
50S ribosomal protein L20 n=6 Tax=Comamonadaceae RepID=RL20_ACISJ
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_1000_bf_scaffold_3164_11
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9751..10287)
DNA (537bp) protein (179aa)
Translation initiation factor IF-3 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T3R0_ACIDE rbh
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
translation initiation factor IF-3; K02520 translation initiation factor IF-3 rbh
SCNpilot_expt_1000_bf_scaffold_3164_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10440..12344)
DNA (1905bp) protein (635aa)
thrS; threonyl-tRNA ligase (EC:6.1.1.3) rbh
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Threonine--tRNA ligase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0N5_9BURK rbh
SCNpilot_expt_1000_bf_scaffold_3164_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12477..13982)
DNA (1506bp) protein (502aa)
Isocitrate lyase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUF0_9BURK
isocitrate lyase
Isocitrate lyase {ECO:0000313|EMBL:AFU46543.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3164_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14235..14657)
DNA (423bp) protein (141aa)
AIG2 family protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5R9_9BURK
AIG2 family protein
AIG2 family protein {ECO:0000313|EMBL:AFU46544.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3164_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14751..15662
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I2G9_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU46545.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3164_16
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15732..16253)
DNA (522bp) protein (174aa)
ribonuclease n=1 Tax=Acidovorax radicis RepID=UPI00023765EF
ribonuclease activity regulator protein RraA
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_3164_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16687..17007
DNA (321bp) protein (107aa)
Swib/mdm2 domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0N6_9BURK
swib/mdm2 domain-containing protein
Swib/mdm2 domain-containing protein {ECO:0000313|EMBL:AFU46547.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3164_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17244..19499
DNA (2256bp) protein (752aa)
Outer membrane protein TonB-dependent receptor n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUF4_9BURK rbh
outer membrane protein TonB-dependent receptor rbh
Outer membrane protein TonB-dependent receptor {ECO:0000313|EMBL:AFU46548.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3164_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19521..20258
DNA (738bp) protein (246aa)
PKHD-type hydroxylase C380_14250 {ECO:0000256|HAMAP-Rule:MF_00657}; EC=1.14.11.- {ECO:0000256|HAMAP-Rule:MF_00657};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
PKHD-type hydroxylase C380_14250 n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5S1_9BURK rbh
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_3164_20
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20377..21420
DNA (1044bp) protein (348aa)
FMN-dependent alpha-hydroxy acid dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I2H2_9BURK rbh
FMN-dependent alpha-hydroxy acid dehydrogenase rbh
FMN-dependent alpha-hydroxy acid dehydrogenase {ECO:0000313|EMBL:AFU46550.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3164_21
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22240..22677
DNA (438bp) protein (146aa)
TonB family protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0P0_9BURK
TonB family protein
TonB family protein {ECO:0000313|EMBL:AFU46552.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3164_22
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22703..23419
DNA (717bp) protein (239aa)
MotA/TolQ/ExbB proton channel n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUF6_9BURK rbh
MotA/TolQ/ExbB proton channel rbh
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:AFU46553.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3164_23
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23423..23836
DNA (414bp) protein (138aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5S5_9BURK
biopolymer transport protein ExbD/TolR
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:AFU46554.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3164_24
unknown

Not on your lists

comp(23937..24317)
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3164_25
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24564..24740)
DNA (177bp) protein (59aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BVB1_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46556.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3164_26
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25159..25326
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0P4_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46557.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying 26 items

View Taxonomy