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SCNpilot_expt_1000_bf_scaffold_4526

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4526_1
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..574)
DNA (573bp) protein (191aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3G2_ACISJ
SCNpilot_expt_1000_bf_scaffold_4526_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(649..2595)
DNA (1947bp) protein (649aa)
Short chain dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWU7_9BURK rbh
short chain dehydrogenase rbh
Short chain dehydrogenase {ECO:0000313|EMBL:AFU44340.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4526_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2824..3417
DNA (594bp) protein (198aa)
Poly granule associated protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZG7_9BURK rbh
poly granule associated protein rbh
Poly granule associated protein {ECO:0000313|EMBL:AFU44339.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4526_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3647..4309
DNA (663bp) protein (221aa)
TetR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0HMW1_9BURK rbh
TetR family transcriptional regulator rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:AFU44338.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4526_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4366..5142
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUD1_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU44337.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4526_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5334..6101)
DNA (768bp) protein (256aa)
pantothenate kinase (EC:2.7.1.33) rbh
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Type III pantothenate kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5X6_9BURK rbh
SCNpilot_expt_1000_bf_scaffold_4526_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6276..6764
DNA (489bp) protein (163aa)
Peptidoglycan-binding LysM n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWU2_9BURK rbh
peptidoglycan-binding LysM rbh
Peptidoglycan-binding LysM {ECO:0000313|EMBL:AFU44335.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4526_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6841..7257)
DNA (417bp) protein (139aa)
Rhodanese domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZF5_9BURK
rhodanese domain-containing protein
Rhodanese domain-containing protein {ECO:0000313|EMBL:AFU44334.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4526_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7274..8149)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HMV7_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU44333.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4526_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8372..9082)
DNA (711bp) protein (237aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUC7_9BURK rbh
phospholipid/glycerol acyltransferase rbh
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:AFU44332.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4526_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9213..9818)
DNA (606bp) protein (202aa)
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5X0_9BURK rbh
histidinol-phosphate phosphatase family protein rbh
Histidinol-phosphate phosphatase family protein {ECO:0000313|EMBL:AFU44331.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4526_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9866..12019)
DNA (2154bp) protein (718aa)
glyS; glycyl-tRNA ligase subunit beta (EC:6.1.1.14) rbh
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Glycine--tRNA ligase beta subunit n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWT5_9BURK rbh
SCNpilot_expt_1000_bf_scaffold_4526_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12040..12834)
DNA (795bp) protein (265aa)
glyQ; glycyl-tRNA ligase subunit alpha (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Glycine--tRNA ligase alpha subunit n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZE7_9BURK
SCNpilot_expt_1000_bf_scaffold_4526_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13252..14328)
DNA (1077bp) protein (359aa)
L-asparaginase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HMV3_9BURK rbh
L-asparaginase rbh
L-asparaginase {ECO:0000313|EMBL:AFU44328.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4526_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14537..15454
DNA (918bp) protein (306aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUC3_9BURK rbh
LysR family transcriptional regulator rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:AFU44327.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4526_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15557..16780)
DNA (1224bp) protein (408aa)
Beta-ketoacyl synthase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5W7_9BURK rbh
beta-ketoacyl synthase rbh
Beta-ketoacyl synthase {ECO:0000313|EMBL:AFU44326.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4526_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16777..17298)
DNA (522bp) protein (174aa)
3-hydroxydecanoyl-ACP dehydratase (EC:4.2.1.60) rbh
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|SAAS:SAAS00064161}; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064166};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
3-hydroxydecanoyl-(Acyl carrier protein) dehydratase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWS9_9BURK rbh
SCNpilot_expt_1000_bf_scaffold_4526_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17415..19049)
DNA (1635bp) protein (545aa)
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148, ECO:0000256|SAAS:SAAS00250216}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01148, ECO:0000256|SAAS:SAAS00088950};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Apolipoprotein N-acyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZD9_9BURK rbh
lnt; apolipoprotein N-acyltransferase rbh
SCNpilot_expt_1000_bf_scaffold_4526_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19049..19933)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HMV0_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU44323.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4526_20
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20040..20660)
DNA (621bp) protein (207aa)
GCN5-like N-acetyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUC0_9BURK rbh
N-acetyltransferase GCN5 rbh
GCN5-like N-acetyltransferase {ECO:0000313|EMBL:AFU44322.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying 20 items

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