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SCNpilot_expt_1000_bf_scaffold_2484

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2484_1
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..837
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J2W6_ACIMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ79755.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCNpilot_expt_1000_bf_scaffold_2484_2
unknown

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1104..1328
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2484_3
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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1410..1778
DNA (369bp) protein (123aa)
Phosphoglycerate kinase n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J3V6_POLGS
phosphoglycerate kinase
Phosphoglycerate kinase {ECO:0000313|EMBL:ADZ68938.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_expt_1000_bf_scaffold_2484_4
unknown

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2457..3212
DNA (756bp) protein (252aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2484_5
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3209..4504
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SHH7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AHB49957.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
relaxase/mobilization nuclease domain-containing protein
SCNpilot_expt_1000_bf_scaffold_2484_6
unknown

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4625..4789
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2484_7
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4795..5895)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SIQ5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AHB49960.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2484_8
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5901..6155)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SJ37_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AHB49959.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCNpilot_expt_1000_bf_scaffold_2484_9
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6230..6802)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SGG3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AHB49956.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCNpilot_expt_1000_bf_scaffold_2484_10
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7595..8617
DNA (1023bp) protein (341aa)
fructose-bisphosphate aldolase; K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] rbh
Fructose-bisphosphate aldolase {ECO:0000256|RuleBase:RU003994}; EC=4.1.2.13 {ECO:0000256|RuleBase:RU003994};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Fructose-bisphosphate aldolase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUY6_PARL1 rbh
SCNpilot_expt_1000_bf_scaffold_2484_11
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8647..9108
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JXD4_HYPDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ25115.1}; Flags: Precursor;; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_2484_12
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9210..9578)
DNA (369bp) protein (123aa)
DNA-binding protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SFG7_9RHIZ
DNA-binding protein {ECO:0000313|EMBL:AHB48704.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
Hemimethylated DNA binding protein; K11940 heat shock protein HspQ
SCNpilot_expt_1000_bf_scaffold_2484_13
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9779..10123
DNA (345bp) protein (115aa)
thiamine pyrophosphate protein n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B304FC
Thiamine pyrophosphate-binding protein {ECO:0000313|EMBL:KFI31500.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massiliensis.;"
COG0028: Thiamine pyrophosphate-requiring enzymes
SCNpilot_expt_1000_bf_scaffold_2484_14
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

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10120..11409
DNA (1290bp) protein (430aa)
ilvG; putative acetolactate synthase II large subunit; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Thiamine pyrophosphate protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LM11_9PROT
Tax=RBG_16_Betaproteobacteria_66_20_curated
Displaying 14 items

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