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SCNpilot_expt_1000_bf_scaffold_2945

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2945_1
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..539)
DNA (537bp) protein (179aa)
Formate/nitrite transporter n=1 Tax=Rhodobacter sp. SW2 RepID=C8RZU0_9RHOB
Formate/nitrite transporter {ECO:0000313|EMBL:EEW25887.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;"
formate/nitrate transporter
SCNpilot_expt_1000_bf_scaffold_2945_2
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1005..1538
DNA (534bp) protein (178aa)
RNA polymerase sigma factor n=1 Tax=Pseudomonas pyrrocinia RepID=UPI0002DB95B8
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. H160.;"
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_expt_1000_bf_scaffold_2945_3
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1528..2286
DNA (759bp) protein (253aa)
Putative transmembrane transcriptional regulator (Anti-sigma factor) n=1 Tax=Microvirga sp. WSM3557 RepID=I4YKK1_9RHIZ
Putative transmembrane transcriptional regulator (Anti-sigma factor) {ECO:0000313|EMBL:EIM24493.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
putative transmembrane anti-sigma factor
SCNpilot_expt_1000_bf_scaffold_2945_4
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2328..5291)
DNA (2964bp) protein (988aa)
Multidrug efflux system, subunit B (AcrB family) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AQ78_AZOBR
mdtB; multidrug efflux system, subunit B (AcrB family)
Multidrug efflux system, subunit B (AcrB family) {ECO:0000313|EMBL:CCC99589.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
SCNpilot_expt_1000_bf_scaffold_2945_5
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5384..6700)
DNA (1317bp) protein (439aa)
Multidrug efflux transporter n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NVH2_AZOS1
mdtA; multidrug efflux transporter; K07799 putative multidrug efflux transporter MdtA
Multidrug efflux transporter {ECO:0000313|EMBL:BAI72401.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
SCNpilot_expt_1000_bf_scaffold_2945_6
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6945..8054)
DNA (1110bp) protein (370aa)
Histone deacetylase family protein n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4K9A7_PSEFL
Histone deacetylase family protein {ECO:0000313|EMBL:EIK61297.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
acetylpolyamine aminohydrolase
SCNpilot_expt_1000_bf_scaffold_2945_7
unknown

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8217..8600
DNA (384bp) protein (128aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2945_8
unknown

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8677..8865
DNA (189bp) protein (63aa)

This feature has no annotations

Displaying 8 items

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