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SCNpilot_expt_1000_bf_scaffold_1256

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1256_1
unknown

Not on your lists

225..383
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1256_2
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

524..823
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF122 RepID=J2HXI4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJL48240.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1256_3
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(860..1201)
DNA (342bp) protein (114aa)
type III restriction endonuclease subunit R n=1 Tax=Rhizobium leguminosarum RepID=UPI00036F6D9B
Restriction endonuclease subunit R {ECO:0000313|EMBL:KGE79862.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
type III restriction protein res subunit
SCNpilot_expt_1000_bf_scaffold_1256_4
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1198..3318)
DNA (2121bp) protein (707aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF122 RepID=J2RTT2_9RHIZ rbh
Restriction endonuclease subunit R {ECO:0000313|EMBL:KGE79862.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1256_5
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3482..3646
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F286_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EHS53215.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1256_6
unknown

Not on your lists

comp(3691..3939)
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1256_7
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4020..5216
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q1T3_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EKF57679.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1256_8
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5557..6534
DNA (978bp) protein (326aa)
GHMP kinase n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F284_9RHIZ rbh
GHMP kinase {ECO:0000313|EMBL:EHS53213.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
GHMP kinase rbh
SCNpilot_expt_1000_bf_scaffold_1256_9
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6531..7532
DNA (1002bp) protein (334aa)
Pyridoxal-5'-phosphate-dependent protein subunit beta n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QRL7_9RHIZ rbh
Pyridoxal-5'-phosphate-dependent protein subunit beta {ECO:0000313|EMBL:EKF57677.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
Pyridoxal-5'-phosphate-dependent protein beta subunit rbh
SCNpilot_expt_1000_bf_scaffold_1256_10
unknown

Not on your lists

comp(7734..7829)
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1256_11
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7846..8301)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F281_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EHS53210.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1256_12
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8304..8543)
DNA (240bp) protein (80aa)
Prevent-host-death family protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PY38_9RHIZ
Prevent-host-death family protein {ECO:0000313|EMBL:EKF57675.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
prevent-host-death family protein
SCNpilot_expt_1000_bf_scaffold_1256_13
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8763..10262)
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F279_9RHIZ rbh
Transporter {ECO:0000313|EMBL:KJF71761.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
Uncharacterized 52.8 kDa protein in TAR-I ttuC' 3'region rbh
SCNpilot_expt_1000_bf_scaffold_1256_14
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10262..10687)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2P9U5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF57673.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
conserved membrane protein of unknown function
SCNpilot_expt_1000_bf_scaffold_1256_15
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10684..11652)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F277_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EHS53206.1}; Flags: Precursor;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1256_16
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11708..12955)
DNA (1248bp) protein (416aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] rbh
Pyridoxal-5'-phosphate-dependent protein beta subunit n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F276_9RHIZ rbh
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:EHS53205.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
SCNpilot_expt_1000_bf_scaffold_1256_17
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12955..14145)
DNA (1191bp) protein (397aa)
Peptidase M24 n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F275_9RHIZ rbh
Peptidase M24 {ECO:0000313|EMBL:EHS53204.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
peptidase M24 rbh
SCNpilot_expt_1000_bf_scaffold_1256_18
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14135..14932)
DNA (798bp) protein (266aa)
Regulatory protein IclR n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q1S0_9RHIZ rbh
Regulatory protein IclR {ECO:0000313|EMBL:EKF57669.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
Regulatory protein IclR rbh
SCNpilot_expt_1000_bf_scaffold_1256_19
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15343..15576)
DNA (234bp) protein (78aa)
XRE family transcriptional regulator n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QRK7_9RHIZ
XRE family transcriptional regulator {ECO:0000313|EMBL:EKF57667.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
Uncharacterized HTH-type transcriptional regulator in smaI restriction system 5'region
SCNpilot_expt_1000_bf_scaffold_1256_20
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15840..16064
DNA (225bp) protein (75aa)
Transcriptional regulator, LuxR family n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F272_9RHIZ
LuxR family transcriptional regulator {ECO:0000313|EMBL:KJF71793.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
Transcriptional regulator, LuxR family
SCNpilot_expt_1000_bf_scaffold_1256_21
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16188..16445
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F271_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EHS53200.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
SCNpilot_expt_1000_bf_scaffold_1256_22
unknown

Not on your lists

comp(16744..17004)
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1256_23
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17163..17435
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F269_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EHS53198.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1256_24
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17453..18328
DNA (876bp) protein (292aa)
Replication initiator protein A n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F268_9RHIZ rbh
RepA replication protein {ECO:0000313|EMBL:KJF71753.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
replication protein rbh
SCNpilot_expt_1000_bf_scaffold_1256_25
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18649..19107
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QRK3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF57662.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1256_26
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19104..19661
DNA (558bp) protein (186aa)
Peptidase S26, conserved region n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F266_9RHIZ rbh
Peptidase {ECO:0000313|EMBL:KJF71751.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
conjugal transfer protein
SCNpilot_expt_1000_bf_scaffold_1256_27
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19697..20023
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F265_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KJF71750.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1256_28
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20029..21036
DNA (1008bp) protein (336aa)
Lytic transglycosylase catalytic n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F264_9RHIZ rbh
Lytic transglycosylase catalytic {ECO:0000313|EMBL:EHS53193.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
lytic transglycosylase, catalytic
SCNpilot_expt_1000_bf_scaffold_1256_29
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21499..22035
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8W3V6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EHS53192.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein
Displaying 29 items

View Taxonomy