name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1547_1
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..527
|
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003726BE8
Protease {ECO:0000313|EMBL:AHB48244.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
peptidase U32
|
|
SCNpilot_expt_1000_bf_scaffold_1547_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(576..1742)
|
Conserved carboxylase domain protein n=7 Tax=Corynebacterium RepID=C0WJX1_9CORY
carboxylase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1547_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1732..1986)
|
pyruvate carboxylase subunit B; K01571 oxaloacetate decarboxylase, alpha subunit [EC:4.1.1.3] id=14625706 bin=bin7_NC10_sister species=Roseovarius sp. 217 genus=Roseovarius taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
pyruvate carboxylase subunit B (EC:4.1.1.3); K01571 oxaloacetate decarboxylase, alpha subunit [EC:4.1.1.3]
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1547_4
unknown
|
Not on your lists |
comp(2045..2338)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1547_5
Peptococcaceae bacterium BRH_c4a, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(3067..3819)
|
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CDZ8_DESTA
ABC transporter {ECO:0000313|EMBL:KJS03693.1}; TaxID=1629716 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4a.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
|
|
SCNpilot_expt_1000_bf_scaffold_1547_6
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3832..4659)
|
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CDZ6_DESTA
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:AFM27787.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1547_7
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(4783..6162)
|
pyruvate carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
Acetyl-CoA carboxylase biotin carboxylase subunit n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QLS3_RALPI
rbh
Putative biotin carboxylase {ECO:0000313|EMBL:GAF50178.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.;"
|
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SCNpilot_expt_1000_bf_scaffold_1547_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6167..6679)
|
Acetyl-CoA carboxylase n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QG37_RALPI
biotin carboxyl carrier protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1547_9
R_Rokubacteria_69_13, Rokubacteria, Bacteria
|
Not on your lists |
comp(6676..7548)
|
Transcriptional regulator, IclR family id=14625722 bin=bin7_NC10_sister species=Achromobacter xylosoxidans genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
IclR family transcriptional regulator
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1547_10
unknown
|
Not on your lists |
7978..8274
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1547_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(8348..9169)
|
Chloride peroxidase {ECO:0000313|EMBL:EEF60940.1}; EC=1.11.1.10 {ECO:0000313|EMBL:EEF60940.1};; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Chloride peroxidase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XH19_9BACT
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1547_12
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9551..10186)
|
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
upp; uracil phosphoribosyltransferase (EC:2.4.2.9); K00761 uracil phosphoribosyltransferase [EC:2.4.2.9]
Uracil phosphoribosyltransferase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TW91_9PROT
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1547_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10329..10898)
|
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18]
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F1CE00
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1547_14
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10981..13089)
|
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI000372DCAE
rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:KJC54022.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
alpha/beta hydrolase fold protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1547_15
Mesorhizobium sp. LSHC414A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13094..13708)
|
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HD10_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX67002.1}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC414A00.;"
TetR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_1547_16
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13731..14507)
|
Membrane protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HDJ0_9RHIZ
rbh
Membrane protein {ECO:0000313|EMBL:ESZ54758.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
Conserved membrane protein of unknown function
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1547_17
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14697..15788
|
alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase; K00104 glycolate oxidase [EC:1.1.3.15]
Alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFI9_AZOSU
Tax=GWA2_Burkholderiales_64_37_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1547_18
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15807..16706)
|
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003635D62
Energy transducer TonB {ECO:0000313|EMBL:KJR63923.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
tonB; Ferric siderophore transporter; K03832 periplasmic protein TonB
|
|
SCNpilot_expt_1000_bf_scaffold_1547_19
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16672..17619)
|
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000369A8FD
Sel1 domain-containing protein repeat-containing protein (fragment); K07126
Sel1 domain protein repeat-containing protein {ECO:0000313|EMBL:CCB65854.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
|
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SCNpilot_expt_1000_bf_scaffold_1547_20
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17619..18299)
|
PKHD-type hydroxylase W911_04285 {ECO:0000256|HAMAP-Rule:MF_00657}; EC=1.14.11.- {ECO:0000256|HAMAP-Rule:MF_00657};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
Fe(II)-dependent oxygenase n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000368B516
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1547_21
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18367..18984)
|
Ligand-gated channel protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SBC1_9RHIZ
Ligand-gated channel protein {ECO:0000313|EMBL:AHB47803.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein
|
|
SCNpilot_expt_1000_bf_scaffold_1547_22
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19021..20802)
|
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00035F3625
TonB-dependent siderophore receptor {ECO:0000313|EMBL:CDR89924.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes.;"
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein
|
|
SCNpilot_expt_1000_bf_scaffold_1547_23
unknown
|
Not on your lists |
21142..21414
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1547_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21473..22363)
|
2,4-dichlorophenoxyacetate dioxygenase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QXS2_9BURK
putative alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1547_25
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22477..23250)
|
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFH09736.1}; EC=1.1.1.162 {ECO:0000313|EMBL:EFH09736.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RSH8_9PROT
short-chain alcohol dehydrogenase
|
|
SCNpilot_expt_1000_bf_scaffold_1547_26
RLO_Entotheonella_69_37, Entotheonella, Bacteria
|
Not on your lists |
comp(23363..23530)
|
molybdopterin oxidoreductase; K07812 trimethylamine-N-oxide reductase (cytochrome c) 2 [EC:1.7.2.3]
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036870C1
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
|